Staphylococcus epidermidis SEI: DP17_205
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Entry
DP17_205 CDS
T03343
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor rpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
seps
Staphylococcus epidermidis SEI
Pathway
seps02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
seps00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DP17_205 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
seps03021
]
DP17_205 (rpoD)
Transcription machinery [BR:
seps03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DP17_205 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
tify
Motif
Other DBs
NCBI-ProteinID:
AIR81637
UniProt:
A0A0N8WCB7
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All DBs
Position
complement(231573..232679)
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AA seq
368 aa
AA seq
DB search
MSDNQVKIKKQTIDPTLTLEDVKKQLIDKGKKEGHLSHEEIAEKLQNFEMDSDQMDDFFD
QLNDNDITLVNEKDSSDTDDKINPNDLSAPPGVKINDPVRMYLKEIGRVNLLSAQEEIEL
AKRIEQGDEIAKSRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVEKFDFSKG
FKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGRDPAPEEIG
EEMDLPPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEAQSPSDHAAYELLKEQL
EDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSRS
KRLKDFMD
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaccaagttaaaattaaaaagcaaacaattgatccgactttaacactagaa
gatgttaaaaaacaattaattgataaaggaaaaaaagaaggtcatttaagtcacgaagaa
atcgctgaaaaactgcaaaattttgaaatggactcagatcaaatggatgatttcttcgac
caattgaatgacaatgacattacacttgtcaatgaaaaagatagttctgacacggatgat
aaaatcaatcctaatgatttgagtgcccctcctggtgtcaaaatcaatgacccagtgcgt
atgtatttaaaggaaattggtagagttaatcttttaagtgctcaagaagaaattgagctt
gcaaaaagaattgaacaaggtgatgaaattgctaaatcacgattagccgaagcaaacttg
cgtttagttgttagtattgctaaacgatatgttggtcgtggaatgttattcttagatttg
attcaagaaggtaatatgggcttaattaaagctgtggaaaagtttgattttagcaaagga
tttaaattttcaacatatgccacttggtggattagacaggctattacacgagcaattgct
gaccaagcacgtacaattcgaataccagtacacatggtagaaacgattaataaattgatt
cgtgttcaacgtcaattattgcaagatttaggaagagatccggctcctgaagaaattgga
gaagaaatggatttaccaccagaaaaagtcagagagattttaaaaattgcacaagaaccc
gtttcattagagacgccaattggtgaagaagatgatagtcatttaggagatttcattgag
gaccaagaagctcaaagtccatctgaccatgcagcatacgaattgttaaaagaacaatta
gaagatgttttagatacacttactgacagagaagaaaatgttttacgtttacgttttggt
ttagatgatggacgaacaagaacactagaagaagttggaaaagtattcggtgtaacacgt
gaaagaattcgtcagattgaagcaaaagctttaagaaaactaagacatcctagtcgaagt
aaacgtcttaaagatttcatggattaa
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