Staphylococcus epidermidis SEI: DP17_2270
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Entry
DP17_2270 CDS
T03343
Symbol
polC
Name
(GenBank) DNA polymerase III, alpha subunit, Gram-positive type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
seps
Staphylococcus epidermidis SEI
Pathway
seps03030
DNA replication
seps03430
Mismatch repair
seps03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
seps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DP17_2270 (polC)
03430 Mismatch repair
DP17_2270 (polC)
03440 Homologous recombination
DP17_2270 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
seps03032
]
DP17_2270 (polC)
03400 DNA repair and recombination proteins [BR:
seps03400
]
DP17_2270 (polC)
Enzymes [BR:
seps01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DP17_2270 (polC)
DNA replication proteins [BR:
seps03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DP17_2270 (polC)
DNA repair and recombination proteins [BR:
seps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DP17_2270 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
HHH_3
tRNA_anti-codon
RNase_H_2
T2SSK
YhfH
Motif
Other DBs
NCBI-ProteinID:
AIR82937
LinkDB
All DBs
Position
2386024..2390340
Genome browser
AA seq
1438 aa
AA seq
DB search
MAMTNREKFKVLADQIKISNQLEQDILEQGELTRIDVSNKNRTWTFQISLPHFLSHEDYL
LFTHAIEEEFKEIATVAIDISIKDTNNQDEFALKYFGHCIDQTRLSPKVKGQLKQKKLIM
SGNVLKVLVSNDIERNHFDKACNGSLVKAFRQCGFEIDKVVFETDSTNHDDDLASLEAHI
QQEDEQSAREATEKLEKMKAEKAKQQDNNESTVEKCQIGKPIQIENIKPIESIIEEEFKV
AIEGVIFDINLKELKSGRHIVELKVTDYTDSLVLKMFTRKNKDDLEHFKALSVGKWVRAQ
GRIEEDTFVRDLVMMMSDIEEIKKTPKQDKAEDKRVEFHLHTSMSQMDGIPNISAYVEQA
AKWGHQALAVTDHNVVQAFPDAHNAAEKYGIKMIYGMEGMLVDDGVPIAYKSTDRNLKDA
TYVVFDVETTGLSNQYDKIIELAAVKVHNGEIIDKFERFSNPHERLSETIINLTHITDDM
LTDAPEIAEVLTEFKEWVGDAIFVAHNASFDMGFIDTGYERLGFGPSTNGVIDTLELSRT
INTEYGKHGLNFLAKKYGVELTQHHRAIYDTEATAYIFIKMVQQMKELGVNNHLEINKKL
TNEDAYKRARPSHVTLIVQNQEGLKNLFKIVSASLVKYYYRTPRIPRSLLNEYREGILIG
TACDEGELFTAVMQKDQSEVEKIAKFYDFIEVQPPALYQDLMDRELIRDNETLTQIYKRL
IDAGKSANIPVIATGNAHYLYEHDAIARKILIASQPGNPLNRSTLPEAHFRTTDEMLDDF
HFLGEEKAYEIVVTNTNELANKIEKVVPIKDKLFTPRMDGANEEIRELSYSNAKKLYGED
LPQIVIDRLEKELDSIIGNGFSVIYLISQRLVKKSLDDGYLVGSRGSVGSSFVATMTEIT
EVNPLPPHYICSHCKTSEFFDDGSVGSGFDLPDKKCPTCGNELIKEGQDIPFETFLGFKG
DKVPDIDLNFSGEYQPNAHNYTKVLFGEDKVFRAGTIGTVAEKTAFGFVKGYLNDQGIHK
RGAEIDRLVKGCTGVKRTTGQHPGGIIVVPDYMDIYDFTPIQFPADDQSAAWMTTHFDFH
SIHDNVLKLDILGHDDPTMIRMLQDLSGIDPKTIPVDDKETMQIFSGPESLGVTEDEILC
KTGTFGVPEFGTGFVRQMLEDTKPTTFSELVQISGLSHGTDVWLGNAQELIRQGICDLSS
VIGCRDDIMVYLMYAGLEPSMAFKTMEFVRKGRGLTDEMVEAMKENNVPDWYLDSCRKIK
YMFPKAHAAAYVLMAVRIAYFKVHHPLYYYAAYFTIRASDFDLITMIKDKTSIRNTVKDM
YSRYMDLGKKEKDVLTVLEIMNEMAHRGFRLQPISLEKSQAFDFIIERDTLIPPFISVPG
LGENVAQRIVEAREEGPFLSKEDLNKKAGLSQKVIDYLDELGSLPDLPDKAQLSIFDM
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
ttggcaatgacaaatcgagaaaagtttaaagtgcttgccgatcaaataaaaatatcaaat
caactagaacaagatattcttgaacaaggtgaactcactcgtatagatgtttcaaataaa
aacagaacatggactttccaaatatcactcccacattttttatctcatgaagattatctt
ctttttacacatgcaattgaagaagaatttaaagaaatagctacagtagcaattgatatt
tcaattaaagataccaacaatcaagatgagtttgctttaaaatatttcggacattgtatt
gatcaaacacgattgtcgccaaaagtgaaaggtcaattgaaacaaaaaaaactcattatg
agtggaaatgttttaaaagtcttagtttcaaatgacattgagagaaatcattttgataag
gcatgtaatggtagtttggttaaagcatttagacagtgtggctttgaaattgataaagtc
gtttttgaaacagattcaacaaatcacgatgatgaccttgcatcgttagaagcacatatc
caacaagaagatgaacaaagtgcaagagaagcaactgaaaaattagaaaaaatgaaagca
gaaaaagcgaaacaacaagataataatgaaagtacagtggaaaaatgtcagattggaaaa
ccaatccagattgaaaatataaaaccaattgaatcaattattgaagaagaattcaaagta
gctattgagggtgttatatttgatattaacctaaaagaacttaagagcggacgtcatata
gttgagcttaaagttactgattacacagattcacttgtattaaaaatgtttacaagaaaa
aataaagatgacttggaacactttaaggcacttagtgttggtaaatgggttagagctcaa
ggtcgtattgaagaagatacttttgttagggatcttgtcatgatgatgtcagatattgaa
gaaattaaaaagacacctaaacaagataaagcagaagataagcgtgtagagtttcattta
catacgtctatgagtcaaatggatggtattcctaatattagtgcatatgttgaacaagct
gctaaatggggacaccaagctttagcagtaacagatcacaacgtagtacaagcttttcca
gatgcacataatgctgccgaaaaatatggtattaagatgatttatggtatggaaggtatg
ctagtagacgatggtgttcctatagcttataaatcaacagaccgtaatttaaaagatgca
acatatgtggtgtttgacgtagagacaacaggtctttctaatcaatatgataaaattatt
gaattagctgcagtaaaagtgcataacggtgaaattatagataagtttgaacgttttagt
aatccacacgaaagattatctgaaaccattatcaaccttacacatatcactgatgatatg
ttaactgatgctcccgaaattgcagaagtgttaactgaatttaaagagtgggttggagat
gctatatttgtagctcataatgcttcatttgatatgggatttattgacacaggatatgaa
aggttaggctttggaccttctacaaacggtgtcattgatacacttgagctttcacgtaca
attaataccgaatatgggaaacatggattgaatttccttgccaaaaaatatggtgtcgaa
ttaacgcaacatcatagagcgatttatgatacagaagcaacagcttatatttttataaaa
atggttcaacaaatgaaagaactaggtgtgaacaaccatctagaaattaataaaaaatta
actaatgaagatgcatataaaagagctcgtccatctcacgttacactcattgttcaaaat
caagaaggtcttaaaaatttatttaaaatagttagtgcttcattagttaagtattattac
cgtacgccaagaattccacgttctcttttaaatgaatatcgagaagggatcttgattggt
acagcttgtgatgagggtgaattattcacagcagtaatgcagaaggatcagtcggaagta
gaaaaaatagcaaagttctatgattttatagaagttcaaccgcctgcgctttatcaagat
ttaatggatagagaattaatacgagataatgaaacgttaacacaaatttacaagcgatta
atagatgctggtaaaagcgctaatatcccagtgattgctactggtaacgcgcattatcta
tatgaacatgatgctatagccagaaaaattttaattgcatcccaaccagggaatccatta
aatcgttcaacattaccagaagctcactttagaaccactgatgaaatgttagatgatttt
cacttcttaggtgaagaaaaagcatatgaaattgttgtaacaaatacaaatgagctcgct
aataaaattgaaaaagtggttcctataaaagataaactatttacgccaagaatggatggg
gctaatgaagaaattcgtgagttgagttattctaatgcgaaaaaactatatggtgaagat
ttaccacaaattgttatagatcgccttgaaaaggaattagatagtattattggtaatggc
ttttctgttatttatctcatatctcaacgtttggtgaagaaatcgctagatgatggttat
ttagttggatcgcgtggttcagttggttctagtttcgtagcaacaatgactgaaattaca
gaagttaatccgcttccaccacactacatttgttcacattgtaagacaagtgagttcttt
gatgatggttcggttggatctggattcgatttaccagataaaaaatgtcctacttgtggt
aatgaattaattaaagaagggcaagatatcccttttgagacattccttggatttaaagga
gataaagttccagatattgatttgaactttagtggtgaatatcaacctaacgctcataat
tacacaaaagtattgtttggtgaagataaagtatttcgtgctggaacaataggtactgtt
gctgaaaaaacagcttttggtttcgtaaaaggttacttaaatgatcaaggtattcacaaa
cgtggtgctgaaattgatcggttggttaaaggttgtacaggggtcaaacgtacaactggt
caacatcctggaggaatcattgttgtaccggattacatggatatttatgattttacaccg
attcaattcccagcagacgaccaaagtgcagcgtggatgacaacccatttcgacttccat
tcaatacacgataatgtcttaaaattagatatattaggacatgatgacccaacgatgatt
cgtatgttacaagacttatcaggaattgacccaaaaactataccagtagatgataaagaa
acaatgcaaatatttagcggtcctgagagtttaggtgttacagaagacgaaatattatgt
aagacaggtacatttggtgtaccagaatttggtactggatttgtacgtcaaatgcttgaa
gatactaagccaacgacattctcagaattagttcaaatttcaggtttatctcatggaacg
gacgtttggttaggtaatgcacaagagttaattcgtcaagggatatgtgacttatctagt
gtgataggctgtcgtgatgatatcatggtatatctgatgtatgctggacttgaaccgtca
atggcttttaaaacgatggaatttgtacgtaaaggtcgcggcttaacagatgaaatggtt
gaagcgatgaaggaaaataacgtgccagattggtatttagattcttgccgtaaaattaaa
tatatgttccctaaagctcatgccgctgcttatgtactgatggctgtaagaattgcatac
tttaaagtacatcatccactatattattatgcagcatactttactataagagcttccgat
tttgaccttataacaatgattaaagataaaacgagtattcgtaatacagttaaagatatg
tattcacgatatatggatttagggaaaaaagagaaagatgtattaactgtattagaaata
atgaatgaaatggcgcatcgaggttttcgattgcaaccgattagtttagaaaaaagccaa
gcttttgacttcatcattgaaagggatacattgattcctccattcatttcagtgccagga
cttggagaaaacgttgcacaaagaattgttgaagcgagagaagagggaccatttttatcc
aaagaagatttaaataaaaaagccggcttatctcaaaaggttattgactatttagatgaa
ttaggctcattgccagatttacctgacaaggcacaattgtcgatatttgatatgtaa
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integrated database retrieval system
