Staphylococcus epidermidis SEI: DP17_2277
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Entry
DP17_2277 CDS
T03343
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
seps
Staphylococcus epidermidis SEI
Brite
KEGG Orthology (KO) [BR:
seps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
seps03016
]
DP17_2277 (truB)
Enzymes [BR:
seps01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DP17_2277 (truB)
Transfer RNA biogenesis [BR:
seps03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DP17_2277 (truB)
Prokaryotic type
DP17_2277 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF3718
Spectrin_SESTD1
Motif
Other DBs
NCBI-ProteinID:
AIR81887
UniProt:
A0AAE5QXM7
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All DBs
Position
2395807..2396724
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AA seq
305 aa
AA seq
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MYNGILPVFKERGLTSHDVVFKLRKILKMKKIGHTGTLDPEVNGVLPICLGDATKVSDYI
MEMGKTYHAMITLGKSTTTEDQTGDILETRAVDKNDINEDTIDQVLQQFEGHIQQIPPMY
SSVKVNGRKLYEYARNNETVERPKRQVFIKDIHRISEVTFQEQTCHFEVEVTCGKGTYIR
TLATDIGLKLGFPAHMSRLTRIASGGFQLESSLTIDQIKELHEHDSLHNELFPIEYGLKG
LKSFQVKDSNFKKKICNGQKFHKKVLSQNVKEPFIFVDSSTQKVLAIYIVHPDKPYEIKP
KKVFN
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtataatggcatactaccggtatttaaggaacgaggtttaacaagtcatgacgtcgtt
tttaaattacgtaaaattttaaaaatgaaaaaaattggtcatacaggaacattagatcct
gaagttaatggtgtgttaccaatttgtttaggcgatgcgacaaaagtcagtgattatatc
atggaaatgggaaaaacttatcacgctatgataacgctaggaaagagtacgactactgaa
gaccaaactggagatattttagaaactagggctgttgataagaatgatattaatgaagat
acgattgaccaagtgttgcagcaatttgaggggcatattcaacaaattccgcctatgtat
tcttctgttaaagtaaatggaagaaaattatatgaatatgcgagaaataatgaaactgtc
gaacgccctaaacgacaagtttttattaaagatatacatagaatatctgaagttactttc
caggagcagacatgtcattttgaagttgaagtaacatgtggtaaaggaacttatattaga
actttagctacagatattggacttaaacttggttttccagctcatatgtcacgtctaact
agaattgcttctggcggttttcaattagaaagtagtttaacgattgatcaaattaaagaa
ttacatgagcatgattcattacataatgaattgtttcctatagaatatggcttaaaaggt
ctgaaatcattccaagtgaaagattcaaattttaaaaagaaaatctgtaacggtcaaaaa
tttcataaaaaagtgttaagtcaaaatgttaaagaaccttttatatttgtcgatagtagc
actcaaaaagttttagcaatatatatagttcatccagataaaccttatgaaataaaacct
aaaaaagtttttaattaa
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