Staphylococcus epidermidis SEI: DP17_2292
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Entry
DP17_2292 CDS
T03343
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
seps
Staphylococcus epidermidis SEI
Pathway
seps03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
seps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DP17_2292 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seps03019
]
DP17_2292 (rny)
Messenger RNA biogenesis [BR:
seps03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DP17_2292 (rny)
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
CBM_21
KH_2
Glt_symporter
Motif
Other DBs
NCBI-ProteinID:
AIR82426
UniProt:
A0A2G7I0F2
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Position
2414085..2415644
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AA seq
519 aa
AA seq
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MNLLSLLLILLGIILGVVVGYIVARNLLHQKQVQARQTADDIVSYANKEADNIKKEKLLE
AKEENQILKEQAENELRERRGELQRQETRLLQKEENLDRKSDLLDKKDEILEQKESKLEE
RQQQVDAKESSVQTLIMKHEQELERISGLTQEEAVKEQLQRVEEELSQDIAILVKEKEKE
AKEKVDKTAKELLATTVQRLAAEHTTESTVSVVNLPNDEMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVILSGFDPIRREIARTALVNLVSDGRIHPGRIEDMVEKARKEVDDIIRD
AGEQATFEINVHNMHPDLVKILGRLNYRTSYGQNVLKHSIEVAHLSGMLAAELGEDVTLA
KRAGLLHDVGKAIDHEVEGSHVEIGVELAKKYNENNIIINAIHSHHGDVEPTSIISILVA
AADALSAARPGARKETLENYIRRLERLETLSESYDGVEKAFAIQAGREIRVVVSPEEIDD
LKSYRLARDIKNQIEEELQYPGHIKVTVVRETRAIEYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
gtgaatttattaagcctcctactcattttgctggggattattctaggcgttgttgtaggg
tatattgttgcccgaaatttattacaccaaaaacaagttcaagcaagacaaactgccgat
gatattgttagctatgctaataaagaagcagacaatattaaaaaagaaaaattacttgag
gcaaaagaagagaaccaaattttaaaagaacaagctgagaatgaactgcgtgaaagacgt
ggtgaacttcaaagacaagaaacccgacttcttcaaaaagaagaaaatttggatcggaaa
tctgatcttttagataaaaaagatgagattttggaacaaaaagaatcaaaacttgaagaa
agacaacaacaagtagatgcaaaagagagtagtgttcaaacattaataatgaagcatgaa
caagaattagaacgcatctccggtctcactcaagaagaagctgtgaaagaacagcttcaa
agagttgaagaagaactgtcacaagatattgcaatacttgttaaagaaaaagaaaaagaa
gcgaaagaaaaagttgataagacagctaaagaattacttgctacaactgtacaaagatta
gcagccgaacatacaactgaatcaactgtttcagtcgtaaatctgcctaacgatgaaatg
aaaggtcgtatcataggtagagaaggtagaaatatacgcacattagaaacacttactggc
atagatttaattattgatgacacaccagaagcagttattttatcaggttttgacccaatt
agacgtgaaattgctagaactgcactagttaatttggtttctgatggacgtattcatcct
ggacgtattgaagatatggtcgaaaaagctagaaaggaagtagacgatatcattagagat
gctggagaacaagctacctttgaaataaatgtacacaatatgcatcctgatttagtgaaa
attttgggtcgattaaattatcgaactagttatggtcagaatgtacttaaacattcaatt
gaagttgcccacctttcaggtatgcttgcagcagaattaggagaggatgttactttagct
aaacgtgctggattattacatgatgttggtaaagccattgatcatgaagttgaaggtagt
cacgtagaaataggtgttgaattagctaagaaatataatgaaaataacataattattaat
gctattcactcacatcatggtgatgttgaaccaacctctatcatttctattttagttgca
gcagctgatgcattatcagcagcgcgaccaggtgcacgtaaagagacacttgaaaattat
attagaagacttgagagactcgaaacgttatctgaaagttatgatggggtagaaaaagca
tttgctatacaagctggtagagagattcgtgtagtcgtctcacctgaagaaattgatgat
ttaaaatcatatagattggcaagagatattaagaaccaaattgaagaagagttacaatat
cctggacatatcaaagtgacagttgttcgagagactagagcaatagaatatgctaaataa
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