KEGG   Staphylococcus epidermidis SEI: DP17_2292
Entry
DP17_2292         CDS       T03343                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
seps  Staphylococcus epidermidis SEI
Pathway
seps03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:seps00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DP17_2292 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:seps03019]
    DP17_2292 (rny)
Messenger RNA biogenesis [BR:seps03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     DP17_2292 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B CBM_21 KH_2 Glt_symporter
Other DBs
NCBI-ProteinID: AIR82426
UniProt: A0A2G7I0F2
LinkDB
Position
2414085..2415644
AA seq 519 aa
MNLLSLLLILLGIILGVVVGYIVARNLLHQKQVQARQTADDIVSYANKEADNIKKEKLLE
AKEENQILKEQAENELRERRGELQRQETRLLQKEENLDRKSDLLDKKDEILEQKESKLEE
RQQQVDAKESSVQTLIMKHEQELERISGLTQEEAVKEQLQRVEEELSQDIAILVKEKEKE
AKEKVDKTAKELLATTVQRLAAEHTTESTVSVVNLPNDEMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVILSGFDPIRREIARTALVNLVSDGRIHPGRIEDMVEKARKEVDDIIRD
AGEQATFEINVHNMHPDLVKILGRLNYRTSYGQNVLKHSIEVAHLSGMLAAELGEDVTLA
KRAGLLHDVGKAIDHEVEGSHVEIGVELAKKYNENNIIINAIHSHHGDVEPTSIISILVA
AADALSAARPGARKETLENYIRRLERLETLSESYDGVEKAFAIQAGREIRVVVSPEEIDD
LKSYRLARDIKNQIEEELQYPGHIKVTVVRETRAIEYAK
NT seq 1560 nt   +upstreamnt  +downstreamnt
gtgaatttattaagcctcctactcattttgctggggattattctaggcgttgttgtaggg
tatattgttgcccgaaatttattacaccaaaaacaagttcaagcaagacaaactgccgat
gatattgttagctatgctaataaagaagcagacaatattaaaaaagaaaaattacttgag
gcaaaagaagagaaccaaattttaaaagaacaagctgagaatgaactgcgtgaaagacgt
ggtgaacttcaaagacaagaaacccgacttcttcaaaaagaagaaaatttggatcggaaa
tctgatcttttagataaaaaagatgagattttggaacaaaaagaatcaaaacttgaagaa
agacaacaacaagtagatgcaaaagagagtagtgttcaaacattaataatgaagcatgaa
caagaattagaacgcatctccggtctcactcaagaagaagctgtgaaagaacagcttcaa
agagttgaagaagaactgtcacaagatattgcaatacttgttaaagaaaaagaaaaagaa
gcgaaagaaaaagttgataagacagctaaagaattacttgctacaactgtacaaagatta
gcagccgaacatacaactgaatcaactgtttcagtcgtaaatctgcctaacgatgaaatg
aaaggtcgtatcataggtagagaaggtagaaatatacgcacattagaaacacttactggc
atagatttaattattgatgacacaccagaagcagttattttatcaggttttgacccaatt
agacgtgaaattgctagaactgcactagttaatttggtttctgatggacgtattcatcct
ggacgtattgaagatatggtcgaaaaagctagaaaggaagtagacgatatcattagagat
gctggagaacaagctacctttgaaataaatgtacacaatatgcatcctgatttagtgaaa
attttgggtcgattaaattatcgaactagttatggtcagaatgtacttaaacattcaatt
gaagttgcccacctttcaggtatgcttgcagcagaattaggagaggatgttactttagct
aaacgtgctggattattacatgatgttggtaaagccattgatcatgaagttgaaggtagt
cacgtagaaataggtgttgaattagctaagaaatataatgaaaataacataattattaat
gctattcactcacatcatggtgatgttgaaccaacctctatcatttctattttagttgca
gcagctgatgcattatcagcagcgcgaccaggtgcacgtaaagagacacttgaaaattat
attagaagacttgagagactcgaaacgttatctgaaagttatgatggggtagaaaaagca
tttgctatacaagctggtagagagattcgtgtagtcgtctcacctgaagaaattgatgat
ttaaaatcatatagattggcaagagatattaagaaccaaattgaagaagagttacaatat
cctggacatatcaaagtgacagttgttcgagagactagagcaatagaatatgctaaataa

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