Staphylococcus epidermidis SEI: DP17_2353
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Entry
DP17_2353 CDS
T03343
Symbol
sbcC
Name
(GenBank) nuclease sbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
seps
Staphylococcus epidermidis SEI
Brite
KEGG Orthology (KO) [BR:
seps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seps03400
]
DP17_2353 (sbcC)
DNA repair and recombination proteins [BR:
seps03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DP17_2353 (sbcC)
Archaeal homologous recombinant proteins
DP17_2353 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
ABC_tran
YjcZ
PriA_3primeBD
Motif
Other DBs
NCBI-ProteinID:
AIR83171
LinkDB
All DBs
Position
2475328..2478357
Genome browser
AA seq
1009 aa
AA seq
DB search
MKPLHIVMENFGPFIKETIDFEQVETDQLFLISGKTGSGKTMIFDAIVYALYGMASTKTR
KEGDLRSHFADGKSPMSVIYQFKVNNQTFKIHREAPFIKEGNITKTQAKLNIYELVDNQF
ELRESKVNQGNQFIVQLLGVNAEQFRQLFILPQGEFKKFLQSNSKDKQSILRTLFNSERF
DEIRHLLVENVKQEKVQIENRYTQIENLWNDIDTFNNDELALYKELESSQTDKMIEKFPQ
FNDYGCKILKSFEEAKNKITKELDDLNHKYKVNVELSENTKKLKAEKIKFDDLKKEQNYI
DKLKQELKMIQESKVLITYFTRLQSLKKDKDELVSLHEQSKLNETNYHNEIKGFQKQLEH
LSTRENEITQFNQYLEKNQVFFNQLDKIISSYQQKPVIEEEIKRLYSEYNDLITKKEELT
KEMNNKNKDFAIIEHYTEEIYKLKKIIDESERQKKDEKLFDKLQLDKSSYLSKLKEKKEQ
LNEIESSITNIDATLIDLNDKKDFVNEIKSAMSIGDTCPICGNEIHSLGEHIDFESIAQK
NNKIKRLESKKVKIRDEIIKIETRIEELNHRENELNFEKQEKKDISELQKQLNHLNQLKD
EQQSINKLVENFEKQEKEIVNKIHQFDLDLSRKNTQKEKLEIQINDFERHSQFSSVNDFE
TYYSHAKKQVETYEYENEKTKDKLNELNNKLKIEMNDQKHLTENLTQTSKEINNLELKME
KEMQQLGFESYDQVKSAADLSAQKDEIEREINIYNKNYQSYEIEINRLKELVKGKKLLNL
EELRQSIEKTSLKLDETNSQIATISYKIDNNSNKFNKIKNIIQILDDELKVQKEIFLLSE
ILAGKNDYKLTLENYVLIYYLEKIIFQANQRLSFMSGNRYQLIRREAISLGLSGLEIDVF
DFHSNKSRHISSLSGGETFQASLALALGLSEVVQQESGGITLDSMFIDEGFGTLDQETLE
TAIDTLINLKSSGRMVGIISHVSELKQRIPLILEVTSNQYESHTQFRKN
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
ttgaagcctttacatatagttatggagaactttggcccttttattaaagaaactattgat
tttgagcaagttgaaactgatcaactctttttaattagtggtaaaactggatctggtaaa
acaatgatttttgatgctatagtatacgcattatacggtatggcttcgaccaaaactaga
aaagaaggagatttaagaagtcattttgcagacggtaaatcgccaatgtctgtaatttat
caatttaaagttaataatcaaacttttaaaattcatagagaagcgccatttattaaagag
gggaatataactaaaacacaagccaagttaaatatatatgaattagttgataatcaattt
gaattaagagaaagtaaagtgaatcaaggtaatcaatttatcgtacaattattaggcgtt
aatgctgaacaatttcgtcaattatttattttgcctcaaggagaatttaaaaagtttctt
cagtcaaatagtaaagacaaacaatcgattcttagaacactttttaatagtgagcgattt
gatgagattagacatctacttgtagaaaatgtaaagcaagaaaaagtacaaattgaaaat
agatacactcaaattgaaaatttatggaatgatatagatacatttaataatgatgaattg
gccttatataaagaattagagagttctcagacagataaaatgattgaaaaattcccacaa
tttaatgattatggatgcaaaattctcaagtcatttgaagaagctaagaataaaataact
aaggaattagatgatttaaatcataaatataaagtgaatgttgaattaagtgagaatact
aaaaaattaaaagcggaaaaaatcaaatttgacgatttgaaaaaagaacaaaattatatt
gataaattaaagcaagaattaaaaatgattcaggaatctaaagtattaatcacttatttt
actaggttacaaagtttaaaaaaagataaagatgaattagtgtcacttcatgagcaatca
aaattaaacgaaacaaactatcacaatgaaattaaaggttttcaaaaacaactcgaacat
ttatcaacacgagaaaatgaaataactcaatttaatcagtatctagaaaaaaaccaagtt
ttcttcaatcaattagataagattattagtagttatcaacaaaaaccggtaattgaagaa
gaaataaaaagattatacagtgaatataatgatttaataaccaaaaaagaagaattgacg
aaagaaatgaacaacaagaacaaagattttgcaattattgaacattacactgaagagatt
tataagctgaaaaagattatagatgaatctgaaagacaaaaaaaggatgagaaattattt
gataaattacaactagataaatcatcttatcttagcaaattaaaagagaagaaagaacag
ttaaatgaaattgaatcatcaatcaccaatatagatgcgactttaattgatttgaatgac
aaaaaggattttgtaaatgaaataaagtccgctatgtcaattggagatacctgtccaatt
tgtggtaatgaaatacattcattgggagaacatattgattttgaatcaattgctcaaaaa
aataataaaataaaacggttagaaagtaagaaggtaaaaattcgtgatgaaataatcaaa
atagaaactcgaattgaagaattaaatcatagagaaaatgaattaaattttgagaaacaa
gaaaagaaggatattagtgagcttcaaaaacagcttaatcatttgaatcaactaaaagac
gagcaacaaagcataaataagttagtagaaaattttgagaaacaagaaaaagaaatagtt
aataaaatacatcagtttgatttagatttgagtcgaaagaacacgcaaaaagaaaaactg
gaaattcaaattaatgattttgaacgacattcacaattttcatcagtaaatgattttgaa
acttattattctcatgctaaaaaacaagttgagacgtatgagtatgagaatgagaaaact
aaagataaattgaacgagttgaataataagttaaagatagaaatgaatgatcaaaaacat
ttaactgagaatttaactcaaacaagtaaggaaataaataatttagaattaaaaatggaa
aaagaaatgcaacaacttggttttgagtcttatgatcaagtcaaaagcgctgcagattta
agtgctcaaaaagatgaaatagaaagagaaattaatatttataataagaactatcaaagt
tatgaaatagagattaacagactcaaagaattggttaagggcaaaaaattattaaattta
gaagaattacgacaatctatagaaaaaacaagcttgaaactagatgaaacgaattcacaa
atagctacgattagctataaaatagataataactctaacaaatttaataaaataaaaaat
ataattcagattctcgatgatgaattaaaagtgcaaaaagaaattttcttgctatcagaa
atattagctggtaaaaatgattataaattaacactagaaaattatgttttaatttattac
ttggaaaaaataatttttcaagcgaatcaacgactttcatttatgagtggaaatagatat
caactgattagaagagaggccatttccttagggttaagtggattggaaattgacgtgttt
gattttcattcaaataaatcgagacacataagttcactttcaggaggagaaacatttcaa
gcatcactagctttagctttaggattaagtgaagttgtacaacaagaatcaggtggaatc
actttagattctatgtttatagatgaaggatttggcactttagatcaagaaacactcgaa
actgcgatagatacattaattaatttaaaatcatctgggcgcatggttggtataatctca
catgtaagcgaacttaagcaacgcatacctttgattttagaagtgacaagtaaccaatac
gaaagtcatacacaatttagaaaaaattaa
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