Staphylococcus epidermidis SEI: DP17_260
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Entry
DP17_260 CDS
T03343
Name
(GenBank) viral (Super1) RNA helicase family protein
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
seps
Staphylococcus epidermidis SEI
Pathway
seps03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
seps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DP17_260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seps03400
]
DP17_260
Enzymes [BR:
seps01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DP17_260
DNA repair and recombination proteins [BR:
seps03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DP17_260
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
AAA_22
HHH_5
AAA
AAA_12
nSTAND3
TniB
Rad17
Mg_chelatase
NPHP3_N
TsaE
PIF1
Zeta_toxin
AAA_14
AAA_16
T2SSE
AAA_28
NB-ARC
UvrD-helicase
AAA_29
RsgA_GTPase
AAA_18
HHH_3
DUF815
AAA_25
AAA_17
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AIR82001
LinkDB
All DBs
Position
complement(284246..286678)
Genome browser
AA seq
810 aa
AA seq
DB search
MSDPTLFDYSMIKGTVDAILFQNTDNFYTVLKVDTIESNEKFDSMPTVVGFLPNVVEGDV
YTFKGQVVQHPRYGKQLKAETFEKELPQTKEAIISYLSSDLFKGIGKKTAQNIVNTLGEN
AINDILTRPEILESVPSLPKKKQKQIADQINANQESEKIMIRLHDLGFGPKLSMAIYQFY
MGDTLNVLDKNPYQLVYDIKGIGFNKADQLARNVGIEPHSPERLKAALLFTLEEECIKQG
HTYLPRTIVIETTQNLLNEDIEKPIETEQLLEIIDVLSEEKKLISEADQVSIPSLYYSEL
KSVQNLYRIKTNTSKLKEIEQSDLQIHIGDIESQNEVNYSASQKEALETAINSKIMLLTG
GPGTGKTTVIKGIVELYAEIHGLSLDYDDYNEDDYPVVLAAPTGRASKRLHESTGLEAMT
IHRLIGWNQDTRPQDILENEINARLIIIDEMSMVDTWLFHQFLSAVPLEAQIVFVGDEDQ
LPSVGPGQVFKDLIDSEIIPRVNLTEVYRQQDGSSIIDLAHRMKLNEPIDITKRYHDRSF
IRCGTNQIPDVVDKVVKSAVAKGYDMSDIQVLAPMYKGNAGIKRLNQVLQSILNPKQQDD
REIEFGEAVFRKGDKVLQLVNRPNDNIFNGDIGIIVGIFWAKENALNKDVLVVDFEGNEI
TFTKQDLMELTHAYCTSIHKSQGSEFPIVIMPIVRQYYRMLQRPILYTGLTRAKQSLVLL
GEQEAFDIGLKTNGQIRLTQLNDLLKSYFGQNKDNLTTNKQTINEQKENNNHLDLKNEKE
NDIQLNESTIFQIDPMINMGEMTPYDFVER
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaccctacactttttgattattcaatgatcaaaggtacagttgatgctatttta
tttcaaaatacggataatttttatactgttctaaaagtagatactatagaatcaaatgaa
aaatttgatagtatgccaactgtggtagggtttcttcccaatgtagttgaaggcgatgtt
tatacttttaaagggcaagtcgtacaacatccacgttatggtaagcaattaaaggctgaa
acatttgaaaaagaattacctcaaactaaagaagccattattagttacttatcaagtgat
ttatttaaaggcatcggtaaaaaaacggctcaaaacattgtaaatacactaggtgaaaat
gctataaatgatattttaactcgtccagaaatcttagaaagtgtacctagtttaccaaag
aagaaacaaaagcaaattgctgatcagattaatgcaaaccaggaatctgagaaaattatg
atacgtttacacgacctagggtttggtccgaaattatcaatggctatatatcagttctat
atgggtgatactttaaatgtcttagataaaaatccttaccaattagtatatgacattaaa
ggtattggttttaataaggctgaccaacttgctcgaaatgtcggtattgagccacattca
cctgaaagattaaaagcagcattattatttacgttagaagaagaatgtattaaacaagga
catacatatctacctcgtacaattgttatagaaacaacacaaaatttactcaatgaagat
attgagaaaccaattgaaacagagcaattactagaaatcattgacgttttatcagaagag
aaaaagttaatatctgaagctgatcaggtatcaattccaagtttatactattcagaattg
aaaagtgtgcaaaacttataccgaattaaaacaaacacatctaaattaaaagaaatagaa
cagtctgatttacaaatacatattggtgatattgagtcacagaatgaggttaattactct
gcctctcaaaaagaagcgcttgaaacagcaataaattctaaaattatgcttttaactggt
ggtccgggtaccggtaaaaccacagtcattaaaggtatagttgaattatatgcagaaata
catgggctctcgctcgattatgatgattacaatgaagatgattatccagtagtgttagct
gcacccactggtcgtgcttctaagcgccttcacgaatcgacaggtttagaagcaatgaca
attcatcgtttaatcggttggaaccaagatacacgaccacaggatattttagaaaatgag
atcaatgcaagacttattattatcgatgaaatgtcaatggtagatacttggttgttccat
caatttttaagcgctgtgcctttagaagcacaaattgtatttgtcggagatgaagatcag
ttaccatcagtaggtccaggacaggtatttaaagaccttattgattctgaaataataccg
cgtgttaatcttaccgaagtatatcgtcagcaagatggttccagtattattgacttagct
caccgtatgaaattaaatgaacctatcgatattactaaacgttatcatgatcgtagtttt
attcgttgtggtacgaatcaaattccagacgttgttgataaagtagttaaaagcgctgta
gctaaaggctatgatatgagtgatatacaagttttggctcctatgtataaaggtaacgct
ggtattaagagacttaaccaagttctacaatctattcttaatccgaagcaacaagatgat
cgtgaaatagaatttggtgaagctgtgtttagaaaaggggataaagtacttcagttagtt
aatcgacctaatgataatatatttaatggggatataggtataatagtaggtatattttgg
gccaaagaaaatgctctaaataaggatgtgttagttgtagattttgaaggtaatgaaatt
acatttactaaacaagatttaatggaactaacacatgcatattgtacatctatccataaa
tcacaaggttcagaatttcctattgtaattatgcctattgttagacaatattataggatg
ttacaacgtcccattctttatacaggattaactagagctaaacaatcacttgttttgctt
ggtgaacaagaagcatttgatataggtttaaaaacaaatggacaaatacgattaacgcaa
ttaaatgatttgttaaaatcgtattttggacaaaacaaagataatttaactacaaataaa
caaacgattaacgaacaaaaagaaaataacaatcatctggatttgaaaaatgaaaaagaa
aatgatatccaattaaacgagtcgacaattttccaaatcgatccaatgattaatatgggg
gaaatgacgccatatgacttcgttgaacgttga
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