Staphylococcus epidermidis SEI: DP17_320
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Entry
DP17_320 CDS
T03343
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
seps
Staphylococcus epidermidis SEI
Pathway
seps03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
seps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DP17_320 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seps03400
]
DP17_320 (mutM)
Enzymes [BR:
seps01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
DP17_320 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DP17_320 (mutM)
DNA repair and recombination proteins [BR:
seps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DP17_320 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zf_2nd_IFT121
DZR
Zn_ribbon_Nudix
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AIR82371
LinkDB
All DBs
Position
complement(349870..350742)
Genome browser
AA seq
290 aa
AA seq
DB search
MPELPEVEHVKRGIEPFIKSAKIEKVTFAKNVINGKNNNRETIIKGMELDTFKKLTEGYV
INKVERRSKYIIFYIEDHDDDRILVSHLGMAGGFFVVNNLDEISTPNYRKHWQVIFDLDN
EQKLVYSDIRRFGEIRNIVNFDSYPSLLEIAPEPFEEVAFEHYLECLTMKKYKNKPIKQT
ILDHRVIAGAGNIYACEALFRAGITPDKITNSLTKQERKSLFYYVREVLEEGIKYGGTSI
SDYRHADGKTGQMQLHLNVYKQKKCKVCGHSIETKVIAGRNSHFCPNCQR
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactacctgaagttgaacatgttaaaagaggtattgagccatttataaaaagt
gcaaaaatagagaaagtaacttttgctaaaaatgtaattaacggtaagaataataaccgt
gagacgattataaaaggtatggaattagatacttttaaaaaacttactgaaggctatgtt
ataaataaagttgaaagaagaagtaagtacattattttttatatagaggatcatgacgat
gatagaatcttagttagtcatttaggtatggcaggggggttctttgttgttaataacctt
gatgagataagtacaccgaattatcgaaagcattggcaagtcattttcgatttggataat
gaacaaaaattagtctattctgatatcagacggtttggagaaattagaaatatagtcaat
tttgatagttatccatctttattagaaatcgctccagaaccatttgaagaggtggcattt
gaacactatttagaatgtttgactatgaaaaaatataagaataaaccaataaaacaaacg
attcttgatcatcgtgttatagcaggagctggaaatatctatgcctgtgaagctttattc
agagctggtattactccggataaaattactaattcactcactaaacaagaaagaaaatcc
ctcttttattatgttcgagaagttttagaagagggtataaaatatggaggtactagtatt
tcagattataggcatgcagatggtaaaactggacaaatgcaattacatttaaatgtatat
aaacaaaaaaagtgcaaggtttgtggtcattcgattgaaacaaaagtgatagctggtaga
aatagtcatttttgcccaaactgtcagagataa
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