KEGG   Staphylococcus epidermidis SEI: DP17_394
Entry
DP17_394          CDS       T03343                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
seps  Staphylococcus epidermidis SEI
Pathway
seps00740  Riboflavin metabolism
seps01100  Metabolic pathways
seps01110  Biosynthesis of secondary metabolites
seps01240  Biosynthesis of cofactors
seps02024  Quorum sensing
Module
seps_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:seps00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    DP17_394 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    DP17_394 (ribD)
Enzymes [BR:seps01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     DP17_394 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     DP17_394 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD Ago_MID_bact
Other DBs
NCBI-ProteinID: AIR83208
LinkDB
Position
complement(450830..451873)
AA seq 347 aa
MSRFMDDAIQLAKMVNGQTGVNPPVGSVVVKNGRIVGLGAHLKKGDKHAEVQAIEMAGLN
TQGATIYVSLEPCTHHGSTPPCVHKIIEAGISKVIYAVKDTTLVSKGDEILREAGIEVEF
QYNENAAALYRDFFTAKRNEVPEVTVKVSSSLDGKQATDFNESKWITNKEVKEDVYQLRH
EHDAVITGRRTIEADNPLYTTRVPDGKHPIRVILSKKGQLDFNQQIFKDTASEIWIYTEN
EKLKTNKSFIKIINISNCDTTTILQDLYQRGIGKLLVEAGPNITSQFLQSKHLNELILYI
APKLIGGSGKHQFYKTDEVIDLPEATQFEIVDSKLINQNLKLKLRKK
NT seq 1044 nt   +upstreamnt  +downstreamnt
ttgagtagatttatggatgatgctattcaactagcaaaaatggtaaatggacaaacaggt
gttaatccaccagtaggatccgttgttgttaaaaacggtaggattgtaggtttaggtgca
catttaaaaaagggagataaacatgccgaagtacaagctattgaaatggcaggtttaaat
acccaaggtgctaccatatacgtttcattagaaccttgcacacaccatggttcaacacca
ccttgtgtgcataaaatcattgaagcgggcatatctaaggtcatctatgctgttaaagat
actactttagtaagtaagggtgacgagattctgagagaagctggtatagaggttgaattt
caatataatgaaaatgcagctgcattataccgtgacttttttactgctaaaagaaacgaa
gttccagaagtaactgtaaaggtctcatctagtctagatggtaaacaagcaacagacttt
aatgaaagtaagtggataacaaacaaagaagttaaagaagatgtttatcaattaagacat
gagcatgatgcagttattactgggcgtagaaccattgaagcagacaatccattgtataca
accagggttcctgatggaaagcatccgattcgagttattctttctaagaaaggtcaactc
gattttaatcaacaaatatttaaagatactgcatcggagatatggatttacactgaaaat
gaaaaattaaaaacaaataaaagttttattaaaataataaatattagtaattgtgataca
acgacaatattacaagacttatatcaaagaggtattgggaaactgctagtcgaggcaggc
ccaaatattacatctcaatttctccaatccaaacatctaaatgaactcattttatatata
gccccgaaattaattggtggttctggcaaacatcaattttataagactgacgaggtcatt
gatttgcctgaagcaactcaatttgaaattgttgattccaagttaattaatcaaaattta
aaattgaaattacgaaagaagtga

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