Staphylococcus epidermidis SEI: DP17_534
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Entry
DP17_534 CDS
T03343
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
seps
Staphylococcus epidermidis SEI
Pathway
seps03420
Nucleotide excision repair
seps03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
seps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DP17_534 (pcrA)
03430 Mismatch repair
DP17_534 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seps03400
]
DP17_534 (pcrA)
Enzymes [BR:
seps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DP17_534 (pcrA)
DNA repair and recombination proteins [BR:
seps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DP17_534 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
DP17_534 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
GBS_Bsp-like
DEAD
Motif
Other DBs
NCBI-ProteinID:
AIR81857
UniProt:
A0AAE5QXQ8
LinkDB
All DBs
Position
complement(560342..562531)
Genome browser
AA seq
729 aa
AA seq
DB search
MNALVKNMNSEQSEAVRTTEGPLLIMAGAGSGKTRVLTHRIAYLLDEKDVSPYNILAITF
TNKAAKEMKARVEHLVGEEAQVIWMSTFHSMCVRILRRDADRIGIERNFTIIDPTDQKSV
IKDVLKSENIDSKRFEPRMFIGAISNLKNELKTPEDAQKEANDFHSQMVATVYKGYQRQL
SRNEALDFDDLIMTTINLFERVPETLEYYQNKFQYIHVDEYQDTNKAQYTLVKLLANKFK
NLCVVGDSDQSIYGWRGADIQNILSFEEDYPEAKTIFLEQNYRSTKNILNAANEVIKHNS
ERKPKGLWTANSGGDKIQYYEAMTERDEAEYVVKEIMKHQRSGKKYSEMAILYRTNAQSR
VLEETFMKSNIPYTMVGGQKFYDRKEIKDLLSYLRVIANSNDDISLQRIINVPKRGIGPS
SVEKIQTYALQNNISMFDALAEVDFIGLSKKVTQECISFYEMIQNLIKEQEFLEISEIVD
EVLQKSGYRDMLDREQSIESRSRLENLDEFMSVPKDYEENTPLEEQSLINFLTDLSLVAD
IDEADTQNGVTLMTMHSAKGLEFPIVFIMGMEESLFPHIRAIKSEDDHEMEEERRICYVA
ITRAEELLYITNATTRMLFGRSQSNMPSRFLKEIPEDLLDSHTGQKRQTIYPKSQPKRGF
SKRTTSTKKQVSSSDWKVGDKVMHKAWGEGMVSNVNEKNGSVELDIIFKSEGPKRLLAQF
APITKKEDS
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgctagtaaaaaatatgaattcagagcaaagtgaagcggttagaacaacagaa
ggcccattgcttattatggcaggtgctggatcaggaaagacacgtgtgttaacacatcgc
attgcgtatttattagatgaaaaagatgtatcaccttataatattttagctattacgttt
acaaataaagcagctaaagaaatgaaggcgcgtgtcgaacatcttgtgggagaagaagcg
caagtgatttggatgtccacttttcactctatgtgtgtaagaattctgagaagagatgct
gatcgtattggcattgaaagaaatttcactatcattgatcctaccgatcaaaaatcagtg
attaaagatgtattgaaaagtgaaaatatagacagtaagcgatttgagccacgtatgttt
attggtgcaattagcaatttgaaaaatgaattaaaaacacctgaggatgctcaaaaagag
gcgaatgattttcactctcaaatggttgcaacggtttacaaaggttatcaaagacagtta
tcacgtaatgaagcactcgactttgatgatttaattatgacaactattaatttatttgaa
cgtgtacccgaaactctagaatactatcaaaataaatttcaatatatacatgtagatgag
tatcaagataccaataaagcacaatataccttagtaaaactattagcaaacaaatttaaa
aatttatgtgttgttggtgattctgaccaatctatttatggttggagaggagctgatata
caaaatattttatcttttgaagaggactatcctgaggcaaagacaattttcctcgaacag
aactatcgttcaactaagaatattttaaatgctgcaaatgaagttataaaacataattct
gaacgtaaacctaaaggtctatggactgcaaattctggaggagacaaaattcagtattat
gaagctatgactgaaagagatgaagcagaatacgttgttaaagaaataatgaagcatcaa
cgcagtggtaaaaaatatagtgaaatggctatattatatagaacaaatgcccaatcacgt
gtacttgaggaaacatttatgaaatcaaatattccttatacaatggttgggggtcaaaag
ttctatgaccgtaaagaaattaaagatttacttagttatttaagagttattgctaatagc
aatgatgatattagtttgcaacgtattattaacgtgcctaaacgtggtattggaccttca
tctgttgaaaaaatccaaacctatgcacttcaaaataatataagtatgtttgacgcattg
gctgaggtagattttataggtctctctaaaaaggtaactcaagaatgtatcagtttttat
gaaatgattcaaaatttaatcaaagaacaagaatttctcgaaattagtgaaatcgtagat
gaagtactacaaaaatcaggctatagagacatgcttgatcgagaacaaagtattgaatca
cgaagtcgattagaaaacttagatgaatttatgtctgtacctaaagattatgaggaaaat
actcctttagaggaacaatcacttattaattttctaacagatttatcattagttgctgat
attgacgaagcagatacacagaatggtgtaacattgatgacaatgcattcagcaaaaggt
cttgaatttcctatagtttttattatgggaatggaggagtcgttgttcccacatatcaga
gcaataaaaagtgaagatgatcatgaaatggaagaggaacgtcgtatttgttatgtagca
attacacgagcagaagagttgctttatatcacaaatgcaacgaccagaatgttgtttggt
cgttctcaatccaatatgccatctcgatttttaaaagaaatcccagaagacctacttgat
agtcataccggtcaaaaaagacaaactatatatcccaaatctcaacctaaaagaggtttt
agtaagcgtactacatcaactaaaaaacaagtttcatcatctgattggaaagtaggagat
aaagttatgcataaagcatggggtgaagggatggttagtaacgtgaatgaaaaaaatgga
tctgtagagttggatattatatttaaatcagaaggtccaaaacgattattagctcagttc
gcaccaataacaaagaaggaggactcatag
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