Streptococcus equi subsp. zooepidemicus H70: SZO_00940
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Entry
SZO_00940 CDS
T00871
Name
(GenBank) DNA-directed RNA polymerase beta' chain
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
seq
Streptococcus equi subsp. zooepidemicus H70
Pathway
seq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
seq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SZO_00940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
seq03021
]
SZO_00940
03400 DNA repair and recombination proteins [BR:
seq03400
]
SZO_00940
Enzymes [BR:
seq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SZO_00940
Transcription machinery [BR:
seq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SZO_00940
DNA repair and recombination proteins [BR:
seq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SZO_00940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Peptidase_M23
CM_2
Motif
Other DBs
NCBI-ProteinID:
CAW97723
UniProt:
C0MEE4
LinkDB
All DBs
Position
108070..111705
Genome browser
AA seq
1211 aa
AA seq
DB search
MVDVNRFKSMQITLASPSKVRSWSYGEVKKPETINYRTLKPEREGLFDEVIFGPTKDWEC
ACGKYKRIRYKGIVCDRCGVEVTRAKVRRERMGHIELKAPVSHIWYFKGIPSRMGLTLDM
SPRALEEVIYFAAYVVIDPKDTPLEPKSLLTEREYREKIQEYGHGSFIAKMGAEAIQDLL
KRVDLVTEIAELKEELKTATGQKRIKAVRRLDVLDAFNKSGNKPEWMILNILPVIPPDLR
PMVQLDGGRFAASDLNDLYRRVINRNNRLARLLELNAPGIIVQNEKRMLQEAVDALIDNG
RRGRPITGPGSRPLKSLSHMLKGKQGRFRQNLLGKRVDFSGRSVIAVGPTLKMYQCGVPR
EMAIELFKPFVMREIVAREFAGNVKAAKRMVERGDERIWDILEEVIKEHPVLLNRAPTLH
RLGIQAFEPVLIDGKALRLHPLVCEAYNADFDGDQMAIHVPLSEEAQAEARLLMLAAEHI
LNPKDGKPVVTPSQDMVLGNYYLTMEDAGREGEGMIFKDKDEAVMAYRNGYVHLHSRVGI
AVDSMPSKPWKDSQRHKIMVTTVGKILFNDIMPEDLPYLQEPNNANLTEGTPDKYFLEPG
QNIQEVIDSLPINVPFKKKNLGNIIAETFKRFRTTETSAFLDRLKDLGYYHSTLAGLTVG
IADIPVIDNKAEIIEAAHHRVEEINKAFRRGLMTDDDRYVAVTTTWREAKEALEKRLIET
QDPKNPIVMMMDSGARGNISNFSQLAGMRGLMAAPNGRIMELPILSNFREGLSVLEMFFS
THGARKGMTDTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLLIRAITDGKEVTETL
EERLQGRYTRKSVKHPETGEVLIGADQLITEDMARKIVDAGVEEVTIRSVFTCATRHGVC
RHCYGINLATGDAVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVASNTDITQGLPRIQE
IFEARNPKGEAVITEVKGTVIEIEEDASTRTKKVYVQGKTGMGEYVVPFTARMKVEVGDE
VNRGAALTEGSIQPKHLLEVRDTLSVETYLLAEVQKVYRSQGVEIGDKHVEVMVRQMLRK
VRVMDPGDTDLLPGTLMDIADFTDANKEIVISGGIPATSRPVLMGITKASLETNSFLSAA
SFQETTRVLTDAAIRGKKDHLLGLKENVIIGKIIPAGTGMVRYRNIEPQAINEVEVIEEA
EATEEPAIIKE
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
gtggttgacgtaaatcgttttaaaagtatgcaaatcacattagcttcaccaagtaaggtc
cgttcatggtcctatggtgaagttaaaaaacctgaaacaatcaactaccgtacattaaaa
ccagaacgtgagggtctttttgacgaagtcatttttggaccaaccaaggattgggagtgt
gcgtgtggcaaatataaacgtattcgctataagggcattgtctgtgaccgttgtggggtc
gaggtaacgcgtgcaaaggttcgtcgtgaacgcatgggacacattgagctgaaggcacct
gtctcacatatctggtattttaagggaatcccatctcgtatgggcttgactcttgatatg
agtcctcgtgctcttgaggaggtaatctattttgcggcttatgtggttattgatccaaag
gacacaccgcttgagccaaaatcactattgacagagcgtgaatatcgtgaaaaaatccaa
gaatatggacatggctcattcattgctaaaatgggggcagaggctattcaagacctccta
aagcgtgttgatttggtcacagaaattgctgagctaaaggaagaattaaaaacagcaaca
ggccaaaagcgtatcaaggctgttcgtcggttagatgtgcttgatgcctttaataaatca
ggcaataagccagaatggatgatcctgaatatcttgccggtcattccaccagatcttcgt
cctatggtgcaattggacggtggtcgctttgcagcctcagacttgaatgacctttaccgt
cgtgtcattaatcgtaataaccgtttagcacgtttgctggagcttaatgcgcctggtatc
attgtgcaaaatgaaaagcgtatgctgcaagaggcggttgatgctttgattgataatggt
cgtcgtggtcgtcctattacaggacctggtagtcgtccgctgaagtccttgagccacatg
cttaaaggaaaacaagggcgttttcgtcaaaacctgcttggtaagcgtgttgacttctca
ggtcgttcagttattgctgtaggtccaacgcttaaaatgtatcaatgtggtgtgccacgt
gagatggctattgagcttttcaagccatttgtgatgcgtgagattgttgcgcgcgaattt
gccggcaatgtcaaagcagctaagcgtatggttgagcgtggcgacgagcgcatttgggat
attctagaagaggtcatcaaggagcacccagtgcttcttaaccgcgcacctactcttcac
aggcttggtattcaggcctttgagccggtgcttattgatggtaaggctcttcgtcttcac
ccacttgtgtgtgaggcctacaatgccgactttgacggagaccaaatggccattcacgtg
ccgctttcagaggaagcacaagcagaggctcgtttgttgatgcttgctgctgagcatatt
cttaaccctaaggacggtaagccagttgtaacaccttctcaggatatggtgctaggaaac
tactatctgacaatggaagatgctggtcgtgaaggcgaaggtatgatctttaaggacaag
gacgaagcggtaatggcttatcgtaatggctatgttcaccttcatagtcgtgttggtatc
gctgttgacagcatgccaagcaagccttggaaggatagtcaaagacacaaaatcatggtg
acaacagtcggtaagattttgtttaatgacatcatgccagaggaccttccttacctccaa
gagccaaataatgctaacctgacagagggcactccagataaatacttcttggagccaggt
cagaatattcaggaggttattgatagcttaccgatcaatgtgcccttcaagaagaaaaat
cttggtaacatcattgcggaaacctttaagcgtttccgtacaacagaaacatcggccttt
cttgaccgcttgaaggaccttggctactatcattcaacccttgcgggcttgacggttggg
atcgctgatattccggttattgacaacaaggctgagatcatcgaggctgctcaccatcgt
gtagaagaaattaataaggccttccgtcgaggcttgatgactgatgatgaccgctatgtt
gcagtcacaacaacgtggcgtgaagcaaaagaagcccttgagaagcgtctgattgaaaca
caggatcctaagaacccaatcgttatgatgatggactcaggagcgcgtggtaacatctct
aacttctcacagctggctggtatgcgaggcttgatggctgcccctaacggccgtattatg
gagcttcctatcctgtctaacttccgcgaaggtttgtctgttttggaaatgttcttctca
actcatggagctcgtaagggtatgactgatacggctcttaagacagctgactcaggctat
ctgacacgtcgtttggttgatgttgcgcaagatgtcatcattcgtgaggacgattgtggt
acagaccgaggccttcttattcgtgctattacagatggtaaggaggtcactgaaacactt
gaggagcgcttgcagggtcgatacactcgtaaatcagtcaagcaccctgagactggtgag
gtactgattggtgctgaccaattaatcactgaggacatggctcgcaagattgttgatgct
ggtgttgaagaggttactattcgctcggtatttacctgtgctactcgtcatggtgtttgt
cgtcactgttatggtatcaacctagcaacaggtgatgcggttgaggttggtgaggctgtt
ggtactatcgctgcccaatctatcggtgagcctggtactcagctgaccatgcgtaccttc
cacacaggaggggttgcctcaaataccgatatcacgcagggtcttcctcgtatccaagaa
atctttgaagcgcgcaaccctaaaggggaagcagttatcacagaggttaaggggactgtt
attgagattgaagaggacgcatcaactcgtactaagaaggtctacgttcaaggtaaaaca
ggcatgggtgaatatgttgtgccatttacagcgcgtatgaaggttgaggttggtgatgag
gtcaatcgtggagctgcccttacagaagggtcaatccagcctaagcacctccttgaggtt
cgtgataccttgtcagttgagacctacttgcttgctgaggttcaaaaggtttaccgcagc
caaggggtagaaatcggagacaagcacgttgaggttatggttcgtcaaatgcttcgcaag
gtacgtgtcatggatccaggtgatacagatcttctgccaggaaccttaatggatattgca
gactttacagatgccaataaggagattgttatctctggaggtattcctgcgacctctcgt
ccagtgcttatgggaatcacaaaagcctcacttgagactaactcattcctatcagcagct
tccttccaggaaaccactcgcgtgctgacagacgctgctatccgaggcaaaaaagaccat
ctattggggcttaaggaaaatgttatcattggtaagatcattccagcaggtactggtatg
gttcgttaccgtaacattgaaccgcaagctatcaatgaggttgaggttatcgaagaagct
gaagctacagaagagccagcaattattaaggaataa
DBGET
integrated database retrieval system
