Streptococcus equi subsp. zooepidemicus H70: SZO_02040
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Entry
SZO_02040 CDS
T00871
Name
(GenBank) DNA polymerase III PolC-type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
seq
Streptococcus equi subsp. zooepidemicus H70
Pathway
seq03030
DNA replication
seq03430
Mismatch repair
seq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
seq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SZO_02040
03430 Mismatch repair
SZO_02040
03440 Homologous recombination
SZO_02040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
seq03032
]
SZO_02040
03400 DNA repair and recombination proteins [BR:
seq03400
]
SZO_02040
Enzymes [BR:
seq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SZO_02040
DNA replication proteins [BR:
seq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SZO_02040
DNA repair and recombination proteins [BR:
seq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SZO_02040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
PHP
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
RNase_H_2
DEDDh_C
DNA_pol_A_exo1
Rv2179c-like
HHH_3
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
CAW97928
UniProt:
B5TE70
A0A0R4J6Q0
LinkDB
All DBs
Position
244190..248587
Genome browser
AA seq
1465 aa
AA seq
DB search
MSDLFGKLMEQIEMPLEIRQSSAFSSADIIEVKVHSVSRLWEFHFSFAEVLPIESYRELS
DRLVRTFEAADIKVTFDIKAETINYSDQLLQAYYQEAFEHEPCNGASFKSSFSRLQVRYD
HHQLIIMAPDFVNNDHFRKNHLPNLAAQFERFGFGRLSIDMVSDQEMTDHLTKDFETNRQ
ALVEKAVQDNIAAQQSLEAMQPPVEETVPSPSFDYRERMAQRQASFDKAVITPMIEVDTE
ENRIVFEGMVFDVERKTTRTGRHIINFKMTDYTSSFAMQKWAKDDDELRKFDLIAKGAWL
RVQGNIENNPFTKSLTMNVQQVKAIVHHERKDLMPEGQKRVEFHAHTNMSTMDALPTVED
LIDTAARWGHQAVAITDHANVQSFPHGYHRARKVGIKAIFGLEANIVEDKVPISFNPIAM
DLHEATYVVFDVETTGLSAMNNDLIQIAASKMFKGNIIEQFDEFINPGHPLSAFTTELTG
ITDNHLVGAKPIQQVLEAFQAFCQGTILVAHNASFDVGFMNANYDRYGLAKISQPVIDTL
ELARNLYPEYKRHGLGPLTKRFQVSLEHHHMANYDAEATGRLLFIFLKEAREKHGITNLL
QLNTDLVAEDSYKKARIKHATIYVQNQLGLKNMFKLVSLSNVKYFEGVPRIPRTVLDQYR
EGLLLGTACSDGEVFDAVLTQGIDAAVDLAKYYDFIEIMPPAIYQPLVVRELIKDQAGVE
QIIRDLIEVGRRAQKPVLATGNVHYIEPEDAIYRDIIVRSLGQGAMINRTIGRGEAAKPV
PLPEAHFRTTNEMLDDFAFLGKDLAYEVVVKNTQALADRIEEVEVVKGDLYTPYIDKAEE
TVAELTYQKAFAIYGNPLPDIIDLRIEKELTSILGNGFAVIYLASQMLVNRSNERGYLVG
SRGSVGSSFVATMIGITEVNPMPPHYVCPSCQHSEFITDGSVGSGYDLPNKACPRCGTLY
KKDGQDIPFETFLGFDGDKVPDIDLNFSGDDQPNAHLDVRDIFGEEYAFRAGTVGTVAEK
TAYGFVKGYERDYGKFYPDAEVDRLAAGAAGVKRTTGQHPGGIVVIPNYMDVYDFTPVQF
PADDVTASWQTTHFNFHDIDENVLKLDVLGHDDPTMIRKLQDLSGIDPITIPADDPDVMA
LFSGTEVLGVTPEQIGTPTGMLGIPEFGTNFVRGMVNETHPTTFAELLQLSGLSHGTDVW
LGNAQDLIKEGIATLKTVIGCRDDIMVYLMHAGLEPKMAFTIMERVRKGLWLKISEEERS
SYIKAMRQNNVPDWYIESCGKIKYMFPKAHAAAYVLMALRVAYFKVHHPIMYYCAYFSIR
AKAFELKTMSGGLAAVKARMEDISNKRKRNEASNVENDLFTTLEIVNEMLERGFKFGKLD
LYKSEATEFQIEGDTLIPPFIALEGLGENVARQIVKARQDGEFLSKMELRKRGGASATLV
DKMDELGILGNMPDDNQLSLFDDFF
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatttattcggtaaattgatggaacaaattgaaatgccacttgagataagacaa
tcaagtgccttttcgtctgctgatattatcgaggtcaaggtgcattcagtgtctcgtctg
tgggaatttcatttttcctttgcagaggttctcccgatagagagctatcgagagctgtca
gataggcttgtgagaacctttgaggcagcagatattaaggtaacatttgacatcaaggca
gagacaattaattattcggatcagctgctgcaagcctactatcaagaagcatttgagcat
gagccctgtaatggggctagcttcaagtcatctttttctagacttcaggtcaggtatgac
catcatcagctgatcattatggcacctgactttgtgaataatgatcactttaggaaaaat
catttacctaatctggcagctcagtttgagcgctttggctttgggaggctatcgattgat
atggtgtctgatcaggagatgacagatcatttgacaaaagactttgagaccaaccgtcag
gctctggtggaaaaggctgtacaagataatatcgcagcacagcaatcattggaggccatg
cagccaccagttgaggagacagtaccaagcccaagctttgactatagagagcgtatggct
cagcgccaagcaagctttgataaggcggtcattacaccaatgattgaggtggatacagaa
gaaaatcgcattgtttttgaaggaatggtctttgatgtggagcgcaagacgacaagaaca
ggccgccatattatcaacttcaagatgacagattacacctcctcctttgccatgcaaaaa
tgggccaaagatgacgatgagctcagaaaatttgatctgattgcgaagggagcttggctg
cgcgttcagggaaatatcgaaaacaaccccttcaccaagagcctaaccatgaatgtgcag
caggttaaggcgattgttcaccatgagcgtaaggacctcatgccagaagggcaaaagcgt
gttgaatttcatgcacacaccaacatgtccacaatggacgctctaccgacggtagaagat
ctgattgatacagcagccaggtggggacatcaggcagtagcgattactgaccacgctaat
gttcagagctttccgcacggttatcatagagcgcgcaaggtaggaatcaaggcaatcttt
ggcttagaggctaatatcgttgaggataaggtgcctatttccttcaatcctatcgctatg
gacctgcatgaagccacctatgttgtctttgatgtagagaccaccggtctttctgccatg
aacaatgatttgattcagatcgcagcttccaaaatgttcaagggaaatatcattgagcag
tttgatgagtttatcaatccaggccaccccttatctgcttttacaacagaattgacaggg
attacagataatcatttggtaggagctaagcctatacagcaggtgctagaggcatttcag
gccttttgccagggcactatcctagttgcccacaatgctagctttgacgtgggctttatg
aatgccaactacgatcggtatggtctagcaaaaatcagccagccggttattgatacccta
gagcttgctagaaacctgtaccctgagtataagcggcatggtttaggccctttaaccaaa
cgctttcaggttagtcttgagcaccatcacatggccaattacgatgctgaagcaacaggg
cgtctgctctttatctttctaaaggaagctagagaaaagcatggcattacaaacctgctt
cagctcaatacggatctggtggcggaggattcctataaaaaggctcggatcaagcacgcc
acgatctatgttcaaaatcagctaggtctcaaaaacatgtttaagctggttagcctttca
aatgtgaagtattttgaaggggtgccaagaattccaaggactgtccttgatcagtatcgt
gaaggcctgttgcttggcacagcatgctcagacggcgaggtctttgacgctgttttgacc
cagggaattgatgctgctgttgatctggccaaatactatgattttatcgaaatcatgccg
cctgcaatctaccagcccttggtagtccgagagctaatcaaggatcaagcaggagttgag
cagattattcgcgatttgattgaggttggccgcagggcacaaaagcctgtcttagccact
ggaaacgtgcactacattgagccagaggacgctatttatcgtgacattatcgttcgtagt
ctagggcaaggtgccatgattaatcgtaccattggtcgcggagaagcagccaagcctgtc
ccgttaccagaggcccattttagaacaaccaatgaaatgcttgatgattttgccttttta
ggtaaggacttggcctatgaggttgttgtgaaaaatacccaagcccttgctgatcggatt
gaggaggtggaggttgttaagggagacctatataccccatatatcgataaggcagaagag
acagtagctgagctgacttatcagaaggcctttgctatctatggcaacccacttccagat
attattgatctgcgaattgaaaaggagctaacgtctatcttgggaaatggctttgcggtg
atttacctagcctcacaaatgctggttaatcgctccaatgagcgtggttatctggtaggc
tcgcgtggctctgttggttcaagctttgttgcgaccatgattggtatcacagaggtcaat
ccaatgccgcctcattatgtctgcccaagctgtcagcactcagagtttatcacagatggc
tcggtcggatccggctacgatttgccaaacaaggcctgtcctagatgtgggacgctgtac
aaaaaggacggacaggatattccctttgagaccttccttggctttgatggggataaggtt
ccagatattgatttgaacttctcaggagatgatcagcccaatgcccacttggacgttcgt
gatatctttggggaagaatacgcctttcgtgccggtactgttggtaccgtcgccgaaaaa
acagcctatggctttgttaagggctatgagcgagattacggcaagttttatccagatgct
gaggttgatcgtctagctgccggtgcagctggtgttaagcggacaactggtcagcaccct
ggtgggatcgttgttatccctaactatatggacgtttatgattttacacctgtgcagttt
ccagcagatgatgtgacagcctcatggcagacgacccactttaatttccatgatattgat
gaaaatgtcctaaagctcgatgtgctcggtcatgatgatcccaccatgattcgtaagctg
caggatttatcaggtattgatccgattactattccagcagatgatcctgacgtgatggca
cttttttctggaacagaggtgctcggagtgactcctgaacaaattggaacaccaacaggt
atgcttgggattccagagtttggaacgaactttgttcgtggcatggtgaatgagacccac
ccaacgacctttgcagaattgctgcagctatcaggtctatcgcatggaacggacgtctgg
ctgggtaatgctcaggatctgatcaaagaaggcattgccaccctaaaaacagttatcggt
tgtcgagatgacatcatggtttacctcatgcatgctggtctagagcctaagatggccttt
accatcatggagcgtgtgcgtaaggggctctggctaaagatttccgaggaggagcgcagc
tcctatatcaaggccatgcggcaaaacaacgtcccagactggtacatcgaatcctgtggt
aaaatcaagtacatgttccccaaggctcacgctgccgcctatgttttgatggcattgcga
gtggcttatttcaaggttcatcaccccatcatgtattactgtgcttatttctctattcgt
gccaaggcctttgagctcaaaaccatgagtggtgggctagctgctgtcaaggctcgcatg
gaggacatcagcaacaagcgcaagcgcaatgaagcctcaaacgttgaaaatgacctgttt
accactttagaaattgtcaatgaaatgcttgagagagggtttaagtttggcaagctagac
ctttacaagagcgaggcaactgagtttcaaattgaaggggataccctaattccacctttt
attgccttagaaggcttgggagaaaacgttgctagacaaatcgtcaaggctcgccaagat
ggtgaatttctatcaaaaatggaattacgcaagcgtggtggtgcttctgccactctagtt
gataagatggacgagctgggcattttaggaaatatgccagatgacaatcagctgagtcta
tttgatgactttttctaa
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