Streptococcus equi subsp. zooepidemicus H70: SZO_02120
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Entry
SZO_02120 CDS
T00871
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
seq
Streptococcus equi subsp. zooepidemicus H70
Pathway
seq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
seq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SZO_02120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seq03019
]
SZO_02120
03016 Transfer RNA biogenesis [BR:
seq03016
]
SZO_02120
Enzymes [BR:
seq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SZO_02120
Messenger RNA biogenesis [BR:
seq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SZO_02120
Transfer RNA biogenesis [BR:
seq03016
]
Prokaryotic type
tRNA degradation factors
SZO_02120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
KH_2
S1_2
OB_RRP5_4th
TRAM
SPATA25
Motif
Other DBs
NCBI-ProteinID:
CAW97943
UniProt:
C0MFB1
LinkDB
All DBs
Position
254728..256872
Genome browser
AA seq
714 aa
AA seq
DB search
MSKQTFTTTFAGKPLVVEVGQVAKQANGATVVRYGESTVLTAAVMSKKMSTGDFFPLQVN
YEEKMYAAGKFPGGWMKREGRPSTDATLTARLIDRPIRPMFAEGFRNEVQVINTVLSYDE
DASAPMAAMLGSSLALSISDIPFNGPIAGVQVAYVEGEFIINPDKAQQEASLLELTVAGT
KDAINMVESGAKELPEAIMLEALLVGHKAIQELIAFQEEIVAAVGKEKAEVELLQVAADL
QAEIIETYNADLQQAVQVEEKKAREAATEAVKEQVMAAYEERYAEDEEHDRIMRDVAEIL
EQMEHAEVRRLITEDKVRPDGRRVDEIRPLAAEIDFLPRVHGSGLFTRGQTQALSVLTLA
PMGDTQIIDGLEPEYKKRFLHHYNFPQYSVGETGRYGAAGRREIGHGALGERALAQVLPS
LEEFPYAIRLVAEVLESNGSSSQASICAGTLALMAGGVPIKAPVAGIAMGLISDGTNYTV
LTDIQGLEDHFGDMDFKVAGTRQGITALQMDIKIEGITPQILEEALAQAKKARFEILDLI
EATIAEPRPELAPTAPKIDTIKIDVDKIKVVIGKGGETIDKIIAETGVKIDIDEEGNVSI
YSSDQDAINRAKEIIASLVREAKVGEVYHAKVVRIEKFGAFVNLFDKTDALVHISEIAWS
RTANVSDVLEIGEEVDVKVIKVDDKGRIDASMKALVPRPPKPEKSEAKKEGKHD
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacaaacatttacaacaacctttgcaggcaaaccacttgttgttgaggtcggt
caagtagccaagcaagcaaatggtgccactgtcgttcgttatggggagtctacagtgcta
actgctgctgtcatgtctaagaagatgtcaacaggagactttttcccgcttcaagtcaat
tatgaagaaaagatgtatgcagcaggtaagtttcctggtggctggatgaagcgtgagggg
cgtccttcgacagatgcgaccttaaccgctcgcttgattgaccgccctatccgtcctatg
tttgctgagggctttcgtaatgaggtccaggtgattaatactgtcctgtcttatgacgaa
gatgctagtgcccctatggctgctatgcttggtagctcattagccctatcgatttcagat
attccttttaatgggccgattgctggtgttcaggtggcctatgttgagggtgaatttatc
atcaatcctgataaggcccagcaggaggcttcattattagagttaaccgtagcaggaaca
aaagatgcgatcaacatggttgagtctggtgccaaggaattgccagaggctattatgcta
gaagcgcttttggttggtcataaggctatacaggagttgattgctttccaagaagagatt
gttgcagcagtgggcaaggaaaaagcagaggtagagctattacaggttgctgctgatctg
caggctgagatcatagagacctacaatgctgatttgcagcaggctgttcaggtcgaagag
aaaaaggcgcgtgaggctgcaaccgaggctgtcaaggagcaggtcatggcagcatatgag
gagcgctatgcagaggacgaggagcatgaccgtatcatgcgtgatgtggctgaaattttg
gagcaaatggagcatgctgaggttcgtcgcctcatcactgaggataaggttcgtcctgat
ggccgtcgtgttgatgagatccgcccacttgctgctgagattgatttcttgccgagagta
catggctcaggcctctttacgcgcggtcaaactcaagctttgtccgtcttgaccctagcc
ccaatgggagacactcaaatcattgatgggcttgagcctgagtacaaaaaacgtttcctg
caccactataatttccctcaatattctgttggtgagacaggtcgctatggggcagcagga
cgtcgtgaaattgggcatggtgccttaggtgagcgtgctcttgctcaggtccttccaagc
cttgaggagtttccatatgctattcgtctagtggctgaggtattggagtcaaatggttct
tcctctcaggcttctatctgtgcagggacacttgccttgatggctggtggtgtgccgatt
aaggcaccggttgcgggtattgctatgggacttatctctgatgggacaaactacactgtc
ctaacggatattcaggggttagaggaccattttggcgatatggattttaaggttgcgggg
acacgccaagggattacagcccttcagatggatattaaaattgaaggtatcacacctcaa
atcctagaagaagccttggcgcaggctaaaaaggctcgctttgaaattcttgacttgatt
gaggcaacgattgctgagcctcgtccagaattggcaccaacagcaccaaagattgatacc
atcaagattgatgttgataagatcaaggtggttattggtaagggcggcgaaaccattgac
aaaattatcgctgaaacaggtgtcaagattgatattgacgaggaaggaaatgtttcaatc
tactcaagtgatcaggacgctattaatcgtgctaaggaaatcattgctagcctagtacgt
gaggctaaggtaggagaggtctaccatgctaaggttgtccgtattgaaaaatttggtgcc
tttgttaacctctttgacaagacagatgcgcttgtgcatatctctgaaattgcttggagc
cgcactgctaatgtctcagacgttcttgaaatcggtgaagaggttgacgttaaggttatt
aaggttgatgataagggacgtattgacgcatcaatgaaagccttggtgccacgcccgcca
aagccagaaaaatcagaagcaaaaaaagaaggcaaacatgactaa
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