Streptococcus equi subsp. zooepidemicus H70: SZO_03840
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Entry
SZO_03840 CDS
T00871
Name
(GenBank) putative helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
seq
Streptococcus equi subsp. zooepidemicus H70
Brite
KEGG Orthology (KO) [BR:
seq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seq03019
]
SZO_03840
03009 Ribosome biogenesis [BR:
seq03009
]
SZO_03840
Enzymes [BR:
seq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SZO_03840
Messenger RNA biogenesis [BR:
seq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SZO_03840
Ribosome biogenesis [BR:
seq03009
]
Prokaryotic type
rRNA helicases
SZO_03840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
Cas3-like_C_2
ParcG
Motif
Other DBs
NCBI-ProteinID:
CAW98252
UniProt:
C0MGW2
LinkDB
All DBs
Position
440671..442014
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AA seq
447 aa
AA seq
DB search
MSFHDYHFKHYIQEALDELGFVEPTEVQQRLIPIVSTGRDLVGESKTGSGKTHTFLLPIF
EKLKEEKEEVQAVITAPSRELATQIFEASRQIAKHSKQEIRIANYVGGTDKQRQLDKLKL
SQPQLVIGTPGRIYDLVKSGDLAIHKASTFVVDEADMTMDMGFLSTVDKIASALPKTIQI
LVFSATIPQKLQPFLRKYLTNPVIEQIKTETVIADTIDNWLLSTKGRDKNEQILATLKAI
QPYLAMLFVNTKERADDLHAFLAANGMKAAKLHGGIPPRERKRIMNQVKNLAFEYIVATD
LAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGLPGTAITFYQPSDDSDIKELEKL
GITFIPKVLKNGEFQDTYDRDRRQNREKAYQKLDTEMIGLVKKKKKKIKPGYKKKIQWAV
DEKRRKQRRAEKRAKGRAERQSRKQSF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttcacgattatcactttaagcattatattcaagaggccctagatgagcttggc
tttgtagagccaacagaggttcagcagcgtcttatcccgattgtcagtacaggacgagac
ttagtgggtgagtcaaagacaggctcaggaaagacgcatacctttttgctgcctattttt
gaaaagctcaaggaggaaaaagaagaggttcaagctgtcattacagcacctagccgggaa
ctagcaacacagatttttgaggccagcaggcaaattgctaagcattctaagcaggagatt
cgtattgctaattacgttggagggacagacaagcagcgtcagcttgacaagttaaagctt
agtcagccccagcttgtcattggaacgccaggtcgtatctatgatctagtcaagtcagga
gatttagccattcataaggcttctacctttgttgttgatgaggctgatatgacaatggat
atgggctttttaagcactgtggataagattgcttcagcactgccaaagactatccaaata
cttgtattttcagcaaccattccacaaaagctacagccctttttaaggaagtatttgacc
aatcctgtcattgaacagatcaagacagaaaccgttattgcagatacgattgacaactgg
ctgttatcaaccaagggacgcgataaaaatgagcaaattttggcgactctaaaggctatc
cagccttatctggccatgctttttgtcaataccaaggagagagctgatgacttacatgcc
tttttagcagctaatggtatgaaggcagccaagcttcatggaggtattcctcctagagag
cgcaagcgtatcatgaatcaagtcaaaaacctggcatttgaatacattgtggcaacggat
ttggcggcgcgtggtattgatattgagggggttagtcatgtgattaacgacgccattcct
caagacctatccttttttgtgcatcgtgtggggcggacaggtagaaacggcctgccaggg
acagccattaccttttatcagccaagtgatgattctgatatcaaggagctggaaaagctg
ggcattacctttataccaaaggtcttaaaaaatggcgaatttcaggatacctatgatcgt
gatcgtcgccagaatcgtgaaaaagcttatcagaagctagataccgaaatgattggcctg
gttaagaaaaaaaagaaaaaaattaaaccgggctataaaaagaaaattcaatgggcagtt
gatgaaaagcggcgcaagcagcgacgagcagaaaaacgtgccaagggacgagcagagcgt
cagtccagaaagcaaagcttttaa
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