Streptococcus equi subsp. zooepidemicus H70: SZO_09890
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Entry
SZO_09890 CDS
T00871
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
seq
Streptococcus equi subsp. zooepidemicus H70
Brite
KEGG Orthology (KO) [BR:
seq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
seq03032
]
SZO_09890
03400 DNA repair and recombination proteins [BR:
seq03400
]
SZO_09890
Enzymes [BR:
seq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SZO_09890
DNA replication proteins [BR:
seq03032
]
Prokaryotic type
DNA Topoisomerases
SZO_09890
DNA repair and recombination proteins [BR:
seq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SZO_09890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF2996
Toprim_4
HypA
Motif
Other DBs
NCBI-ProteinID:
CAW99300
UniProt:
C0MFG2
LinkDB
All DBs
Position
complement(1103420..1105552)
Genome browser
AA seq
710 aa
AA seq
DB search
MVTKTATKSKQETKRSATKKKSAAAKKNLVIVESPAKAKTIEKYLGRQYKVVASVGHIRD
LKKSSMSIDFDNHYEPQYINIRGKGPLINALKKEAKNAKKVYLASDPDREGEAISWHLSH
ILGLDPDDNNRVVFNEITKEAIKEAFEGPRKIDMDLVDSQQARRVLDRIVGYSISPILWK
KVKKGLSAGRVQSVALKLIIDREHEIKAFVPEEYWSIDGLFKKGTKKFQASFYGLDGKKM
KLNTNDDVKFVLSQLSSDDFMVSKVEKKERRRHAPLPYTTSSLQQDAANKINFRTRKTMM
VAQQLYEGISLGPNGTQGLITYMRTDSTRISPVAQNDAAGFIVERFGSQYSKHGNRVKNA
TGAQDAHEAIRPSNVNHTPEAIAKFLDKDQLKLYTLIWNRFVASQMTAAVFDTVKVNLEQ
NSVLFVANGSQMKFDGYMAVYNDSDKSKMLPEMTEGEVVKKVTLTPEQHFTQPPARYSEA
SLIKTLEENGVGRPSTYAPTLDVIQRRYYVKLAAKRFEPTELGEIVNQLIVEFFPDIVDV
KFTADMEDKLDQIEIGKEAWQNVIDQFYKPFVKELTKAETEIEKIQIKDEPAGFDCELCG
HPMVVKLGRFGKFYACSNFPECHHTKAITKEIGVSCPACQQGQVIERKTKRNRIFYGCDR
YPECDFTSWDLPVGRSCPKSGDYLVEKKIRGGKQVVCSNEACDYKEEIVK
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
ttggtaacaaaaacagcaactaagtcaaaacaagagacgaaaagatctgctacaaagaaa
aaatcagcagctgctaaaaaaaatctagtcattgttgaatcacctgctaaggctaaaacc
atcgaaaaatatttgggacgtcagtataaggtcgttgcctcggttggtcatattcgtgat
ttgaaaaaatcatcaatgtctattgattttgacaatcattatgagccacagtatattaat
attcgtggtaagggtccgctgattaatgccttaaaaaaagaagcaaagaatgctaaaaag
gtttatctagcaagtgacccggatcgtgagggagaggccatttcatggcatttatcacat
attttgggacttgatcctgatgataacaatcgtgtcgttttcaatgaaatcacaaaggag
gccatcaaagaagcctttgaaggcccaagaaaaattgatatggatttggttgactcacag
caggcacgtcgtgtactggatcgtattgttggttattccatttcgccaattctctggaaa
aaggttaaaaaggggctttcagcagggcgcgtgcaatcggttgctctaaagctaatcatt
gacagagagcatgagattaaggcctttgttcctgaagaatattggtcaattgatggtctc
tttaaaaaaggaacaaaaaaatttcaggcaagcttttacggccttgatggcaaaaagatg
aagctcaataccaatgatgatgttaagtttgttttgtctcagttaagcagcgatgatttt
atggttagtaaggttgagaaaaaagaacgcaggcgtcatgctcctttaccttatacaacc
tcctcattgcagcaggacgcagccaataagattaactttcggactcgtaaaacaatgatg
gttgctcagcagctttacgaggggattagtcttggccctaatggaacacaggggttaatt
acttatatgcgtacggactcaactcgtatcagcccagttgctcaaaatgatgccgcaggc
tttattgttgaacgtttcggtagtcagtactctaagcatggcaatcgagttaaaaatgct
actggtgctcaagacgctcatgaggctattcgaccatctaatgtgaaccatacgccagag
gctattgctaaatttttagataaggatcagctaaagctctataccttgatttggaaccgc
tttgtcgctagtcagatgacagctgctgtgtttgatactgttaaggttaacctagagcaa
aatagtgtcctttttgttgccaatggcagtcagatgaaatttgacggttatatggctgtt
tacaatgattctgataaaagcaagatgcttcctgaaatgacagaaggagaagtggttaaa
aaggttaccttaacacctgaacagcactttactcaaccgccagctcgttattcagaagca
agtctgattaaaacactggaagaaaacggtgttggaaggccatcaacctatgctccaaca
ctcgatgtgattcagcgtcgttattatgttaagctggctgctaaacgctttgagccgacg
gaattaggcgaaattgttaatcaattgattgtggaattcttccctgatattgttgatgtc
aaatttacagctgatatggaagataagcttgatcagatagagatcggcaaagaagcctgg
cagaatgtgattgaccaattctacaagccatttgttaaggagttaaccaaggctgaaacg
gagatcgaaaaaattcaaatcaaggacgagccggctggttttgattgtgagctgtgcggc
cacccgatggttgttaagctgggtagatttggcaagttttatgcttgtagtaattttcct
gagtgccatcatacaaaggctatcacaaaggaaattggagtttcttgtccagcttgtcag
caaggccaagtcattgagcgcaaaacaaagcgtaaccgtattttctatggctgcgatcgt
tatcctgagtgtgactttacctcgtgggatttgccggtaggacggtcttgtccgaagtca
ggcgattaccttgttgagaaaaaaattcgtggaggtaagcaggttgtgtgtagcaatgaa
gcctgtgactataaagaagagattgtgaagtag
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