Streptococcus equi subsp. zooepidemicus H70: SZO_10840
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Entry
SZO_10840 CDS
T00871
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
seq
Streptococcus equi subsp. zooepidemicus H70
Pathway
seq03030
DNA replication
seq03430
Mismatch repair
seq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
seq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SZO_10840
03430 Mismatch repair
SZO_10840
03440 Homologous recombination
SZO_10840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
seq03032
]
SZO_10840
03400 DNA repair and recombination proteins [BR:
seq03400
]
SZO_10840
Enzymes [BR:
seq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SZO_10840
DNA replication proteins [BR:
seq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SZO_10840
DNA repair and recombination proteins [BR:
seq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SZO_10840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
tRNA_anti-codon
HHH_6
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
CAW99466
UniProt:
C0MGK0
LinkDB
All DBs
Position
complement(1197207..1200317)
Genome browser
AA seq
1036 aa
AA seq
DB search
MFAQLDTKTVYSFMDSLIDLNHYFKQAKRLGYQAIGIMDQDNLYGAYHFIKGCQRHGLQP
ILGLEVAITVKEQALTLKLVAKNDTGYQQLLKLSTEKMSGDLDLDTLVQYLEGIAVIVPF
SQSLRDLGLPFDYFIGIDEASDLSKIGSTERLIPFRTVRYFDNAETETLQMLHAIRDNIS
LADTALVAKDQFLAPCQEMTAVFQEKCPEALVNLVNLTASIAYHFDTDLKLPRFNRDKPA
KEELRELTESGLRERQLWKEPYQSRLAEELAIISDMGFDDYFLIVWDLLRFGRSRGYYMG
MGRGSAAGSLVAYSLRITGIDPVKNNLLFERFLNKERYSMPDIDIDLPDIYRSEFLHYVR
DRYGSEHSAQIVTFSTFGPKQAVRDVFKRFGVPEYELTSLTKKIGFKDTLSTVYEKNIAF
RQTINSRLEFQKAFEIAKRIEGNPRQTSIHAAGIVMSDDHLTNHIPLKKGEDMMVTQYDA
SAVEANGLLKMDFLGLRNLTLVQKMQEKVVNDYGLSIDIEAINLEDPETIALFARGDTKG
IFQFEQHGAISLLKRIKPTSFEEIVATTSLNRPGASDYTQNFIKRRQGQENIDLIDPVIA
PILEPTYGIMLYQEQVMQIAQVYAGFTLGKADLLRRAMSKKNLVEMQRMQEDFLNGAKAL
GRSEETARLLFARMEKFAGYGFNRSHAFAYAALAFQLAYFKAHYPEVFFDVMMNYSSSDY
ITDALDFGFEAAQVTINTIPFNDKIERHKIYMGLKNIKGLPREFSYWIIENRPFTSVENF
LCSIPEKYQKTSFLEPLIKIGLFDGFEKNRQKIINNLEGLLTFVNELGSLFADSSFSWVE
TEDYSAAEKYYFEQDLLGVGMSKHPLLAVAEKSTVAVTPITKLVKDTEATLLVQIDAIRV
IRTKSSGQQMAFLSVTDTKKKLDVTLFPEQYAVYKQDLKEGHIYYINGRVKERDNRLQLV
CHQLRLAQSQRYWLLVENHQHDAAISDILTAFSGETPVIIHYQEGKETLELNHIRVDVSK
DLEEAISPYVLKTVFR
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctcagttagatacaaaaacagtttattcctttatggatagtttgattgattta
aatcattattttaaacaagccaaacgattaggctatcaagccatagggattatggatcag
gataatctatatggggcatatcattttattaagggctgtcaaaggcatgggcttcagccg
attttaggtcttgaggtggctattacagttaaagagcaggctcttacgctgaagcttgtt
gcgaaaaatgatacaggctatcagcagctcttaaagctttcgactgaaaaaatgtctgga
gatctagacctagacacattggtgcagtatttagaagggatagcagttatcgttcctttt
agtcagagcttgcgtgatttagggcttccttttgattacttcatcggcattgatgaggca
agtgacttgtcaaagataggctctacagaaagactgattccgtttagaacggtacgttat
tttgataacgcagaaactgagaccttgcagatgctgcatgcgattcgtgataatattagc
ttagcagatacggctctagtagccaaggatcagtttttagcgccttgtcaggagatgaca
gctgttttccaggaaaagtgccctgaggctttggtgaatctcgtaaacctaacagcttcg
attgcttatcattttgataccgatttaaagcttccgagatttaaccgcgacaagccagca
aaagaagagctaagagaattgaccgaatccggtctaagagaaaggcaattgtggaaggag
ccttatcaatctcgtctggcagaggagctggctattatttcagatatggggtttgatgat
tattttctcattgtctgggatttgctgcgctttggaaggagtagaggctattatatgggc
atggggcgtggttcagcagcaggcagtctagtagcttattcgctgcgcattactgggatt
gatcctgtcaaaaacaatttattgtttgaacgctttttgaataaagaacgctacagcatg
cctgatattgatattgatttgcctgatatttaccgctcagagtttcttcattatgttcga
gaccggtatggtagtgagcactcagctcagatcgttaccttttcgacttttggtcctaag
caggctgttcgtgatgtgttcaaacgctttggtgtcccagaatacgagctaacaagccta
actaaaaaaattgggttcaaggataccctgagcactgtttatgagaaaaatatagccttc
agacagaccattaatagccgcttagagtttcaaaaggcatttgagatagctaagcgcatt
gaaggcaatccaagacagacctctattcacgctgctggtatcgtgatgagtgatgaccat
ctgaccaaccatattcccttaaaaaagggggaggatatgatggtgactcagtatgatgcc
agtgctgttgaagctaatggcttgctgaaaatggattttcttggtctgagaaatttgacg
cttgtacagaaaatgcaggaaaaggtggtcaacgattacggtctttcaattgacattgaa
gctattaacctagaggatcctgaaacgatagccttgtttgctaggggtgataccaagggc
atttttcaatttgaacagcatggtgcgattagcctgttaaaacggatcaagccgactagc
tttgaggaaattgttgcgacaaccagcttaaatagaccgggagcaagtgattacacgcag
aattttattaagcgccggcagggacaggaaaacattgatttaatagatccggtgattgct
ccgatattagagccaacctatggtatcatgctttatcaggagcaggttatgcagattgct
caagtttatgcaggctttacacttggaaaggccgatttgctacggcgtgctatgtctaag
aaaaacctcgttgagatgcaaagaatgcaggaggattttctgaacggtgctaaagccttg
gggcgctctgaggagacggccagactattgtttgcccgtatggaaaaatttgcaggctac
ggctttaaccgcagccatgcctttgcttatgctgccctagcctttcagctggcttatttt
aaagcgcattatcctgaggtattttttgatgtcatgatgaattattctagcagtgattac
atcactgatgcgttggattttggctttgaggctgcgcaggtgacgataaacactattccc
tttaatgataagattgagcgtcataagatttatatgggcttaaaaaacatcaaaggcctt
cctagagaattttcgtactggattatcgaaaacagaccttttaccagtgttgaaaacttt
ttgtgcagcattcctgaaaaataccagaaaaccagctttttagagccccttatcaaaata
ggcctgtttgatgggtttgaaaaaaatcgccaaaaaatcattaacaacttagaaggactg
ctaacctttgtcaatgaattgggatcactttttgcggattcctcctttagctgggtagag
actgaggattattcagctgctgagaaatattactttgagcaggatttgcttggtgttggc
atgagtaagcaccccctgttagcagttgctgaaaaaagcacagtagcagtcacaccaatt
acaaagctagtaaaggatacagaagctactttgctggttcaaatagatgctatcagggtt
attcggacaaaatcaagtggacagcagatggcctttttgagtgttactgataccaagaaa
aaattagatgttaccctttttcctgagcaatatgctgtctataagcaagacctaaaagag
gggcatatttactatatcaatggcagggtaaaagaaagagataaccgcttgcagctagtc
tgtcaccagcttcgattagctcagagtcaaaggtattggctattggttgaaaaccatcag
catgatgctgctatttctgacatattaacagccttttcaggggagactcctgttattatc
cattatcaagaaggcaaagaaaccttagagttaaaccatattagggttgatgttagtaag
gatttggaggaggctattagcccctacgtgttgaaaacggtttttcgataa
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