Streptococcus equi subsp. zooepidemicus H70: SZO_16270
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Entry
SZO_16270 CDS
T00871
Name
(GenBank) UvrABC system protein A (UvrA protein)
KO
K03701
excinuclease ABC subunit A
Organism
seq
Streptococcus equi subsp. zooepidemicus H70
Pathway
seq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
seq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SZO_16270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seq03400
]
SZO_16270
DNA repair and recombination proteins [BR:
seq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SZO_16270
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SZO_16270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
RsgA_GTPase
nSTAND1
AAA_29
AAA_22
AAA_21
AAA_33
AAA_23
nSTAND3
NACHT
AAA_18
ATPase
AAA_14
Viral_helicase1
DnaJ_CXXCXGXG
DUF87
MMR_HSR1
cobW
NB-ARC
NTPase_1
DUF4350
Septin
MeaB
PRK
DUF463
T2SSE
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
CAX00370
UniProt:
C0MEL6
LinkDB
All DBs
Position
complement(1820468..1823290)
Genome browser
AA seq
940 aa
AA seq
DB search
MQDKLIIHGARAHNLKNIDVEIPRDKLVVVTGLSGSGKSSLAFDTIYAEGQRRYVESLSA
YARQFLGNMEKPDVDSIDGLSPAISIDQKTTSKNPRSTVGTVTEINDYLRLLYARVGTPY
CINGHGAITASSVEQIVEQVLELPERTRMQILAPLVRRKKGQHKTVFEKIQKDGYVRVRV
DGEIFDVSEVPALSKSKMHNIEVVIDRLLNKDGIRSRLFDSIEAALRLGDGYLMIDTMDG
NELLFSEYYSCPVCGFTVPELEPRLFSFNAPFGSCPTCDGLGIKLEVDLDLVVPDPSKTL
REGALAPWNPISSNYYPTMLEQAMQSFGVDMDKPFEQLSEQEKELILYGSGDQEFHFHYV
NDFGGERSIDIPFEGVVTNINRRYHETNSDYTRNVMRGYMNELTCASCHGYRLNDQALCV
RVGGEHGLTIGQVSELSIADHLQLLDGLELSDNESTIAKPIIKEIHDRLTFLNNVGLNYL
TLSRSAGTLSGGESQRIRLATQIGSNLSGVLYVLDEPSIGLHQRDNDRLIDSLKKMRDLG
NTLIVVEHDEDTMMQADWLIDVGPGAGDFGGQIVASGTPQQVARHKRSITGQYLSGRKSI
PVPLERRAGNGRFIDIKGAAQNNLQNLDVRFPLGKFIAVTGVSGSGKSTLVNSILKKAVA
QKLNRNSEKPGRHRSITGIEHLERLIDIDQSPIGRTPRSNPATYTGVFDDIRELFAQTNE
AKIRGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVYVPCDVCHGRRYNSETLEVHY
KGKNIAEILDMTVDDALVFFSAIPKIARKIQTIKDVGLGYVTLGQPATTLSGGEAQRMKL
ASELHKRSTGKSLYILDEPTTGLHTDDIARLLKVLERFVDDGNTVLVIEHNLDVIKSADH
IIDLGPEGGVGGGQLVATGTPEEVAAVEESYTGQYLKLKL
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgcaagataaattgattattcatggggcacgtgcccataatttaaaaaatattgatgtg
gagattccacgtgataagctcgttgtggtgacaggcttatcagggtctggaaaatctagc
cttgcctttgataccatttatgctgagggacaaaggcgttatgtggagagtttgtcagcc
tatgctaggcaatttttaggcaacatggaaaagcctgatgtggactctatagacgggctt
agtcctgctatttctattgaccaaaaaacaaccagtaaaaatcccagatcaaccgttggt
acggtgacagaaatcaatgattacctcaggcttctttatgcgcgtgtggggactccctat
tgtatcaatgggcatggggctattacggcttcttcggtggagcagattgttgagcaggtg
ctagagctgcctgagcggacgcgtatgcagattttggcgcctcttgtccgtcgtaaaaag
ggtcagcacaagacagtgtttgaaaaaattcaaaaggacggttatgtgcgcgtgcgtgtt
gacggagagatttttgatgtgtcagaggtaccagcattatccaaaagcaaaatgcacaat
atcgaggtcgtcattgatcgcttgctcaataaggacgggatccgcagtcgtctttttgat
tcgatagaggctgcgcttcgcctgggagatggttatctgatgattgatacgatggacggc
aatgagttgctgttttcagagtattattcctgtcctgtatgtggttttacagtgccagag
ctagagcctcgtcttttttcatttaatgcgccctttggctcttgtcctacctgtgatggc
ttagggatcaaactggaggtggatttagatctagttgttcctgatcctagtaagaccttg
agagagggggctcttgctccttggaatcctatctcgtcaaattattacccaaccatgctt
gagcaggcaatgcaaagctttggcgttgatatggacaagccctttgagcaattgagcgag
caggaaaaggagctgatcttgtatggctcaggtgatcaagagttccattttcattatgtt
aatgattttggtggcgagcgcagcattgatattccctttgaaggggttgtgacaaatatc
aaccgtcgctaccatgagaccaacagtgactatacccgcaatgtcatgcgaggttatatg
aacgaattgacctgtgcgagctgtcatggctatcgcctcaatgatcaagccctgtgtgtg
cgtgttggtggtgagcatggcttgacgatcggtcaggtatcagagctatctattgcagac
cacttgcagctgctggatgggcttgagctatcagacaatgaaagcaccattgcaaagcca
attatcaaggaaattcatgatcggctgacctttttgaataatgtcggtctgaattatctg
accttgtctcgctcggcaggcaccttgtctggtggagagagtcagcgtatccgtttggca
acgcaaattggctctaatctgtcaggcgtcctttatgttttggacgagccttctattggt
ctgcaccagcgagataacgatcgcttgattgatagcttgaaaaaaatgcgtgacttggga
aataccttgattgtggttgagcacgatgaggataccatgatgcaggcagattggctgatt
gatgtgggacctggtgctggggactttggtggacagattgttgcctctggaacgcctcag
caggttgctcggcataaaaggtctatcactggtcaatacctatctggacgcaaatcaata
cccgttcctctagagcgacgtgctggcaatggccgatttattgatatcaagggagcagcc
caaaacaatctgcaaaatcttgatgtgaggtttcctctagggaaatttattgcagtgact
ggggtttctggctcaggaaaatcaacgctggttaacagcattctcaaaaaagcagtggct
caaaagctaaaccgtaactccgaaaagccaggcaggcataggtctatcactggcattgaa
catttggagcgtctgattgatattgatcaaagcccaattgggcggacaccgcgctctaat
cctgccacctatactggtgtttttgatgatattcgagagctttttgcccagactaatgaa
gccaagattcgtggctacaaaaaagggcgcttctcctttaatgtaaaaggtgggcgctgt
gaggcctgctctggagatggtattatcaagattgagatgcattttttgccagatgtctac
gttccatgtgatgtttgtcatggcagacgctataattcagagacgctggaggtccattat
aagggtaaaaacattgctgaaattttggatatgacggtagatgatgctctggtatttttc
tcagcgattccaaagattgctcgtaaaattcagacgattaaggacgttgggcttggctat
gttactctagggcagccagcgacaaccctatcaggtggcgaggcccagcgcatgaagctg
gctagtgagctgcacaagcgctcaactggtaaaagcttgtatattttagatgagccaacg
acggggctgcatacagatgacattgcgcgattactgaaggttttagagcgttttgttgat
gatggcaatacggttttagtgattgagcacaatttagatgtcatcaagtcggcagaccat
attattgaccttggtccagaaggcggtgttggtggaggtcaattggttgcaactgggact
cctgaagaggttgccgctgttgaggaaagctacacagggcagtacctgaagctgaaattg
taa
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integrated database retrieval system
