Streptococcus equinus: A6J79_00490
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Entry
A6J79_00490 CDS
T06203
Name
(GenBank) ATP-dependent helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
seqi
Streptococcus equinus
Pathway
seqi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
seqi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A6J79_00490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seqi03019
]
A6J79_00490
03009 Ribosome biogenesis [BR:
seqi03009
]
A6J79_00490
Enzymes [BR:
seqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A6J79_00490
Messenger RNA biogenesis [BR:
seqi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A6J79_00490
Ribosome biogenesis [BR:
seqi03009
]
Prokaryotic type
rRNA helicases
A6J79_00490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
DUF6363
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ARC33043
LinkDB
All DBs
Position
complement(90244..91830)
Genome browser
AA seq
528 aa
AA seq
DB search
MKFTDLNLSEDIQSAVVAAGFEKPSPIQELTIPLALEGKDVIGQAQTGTGKTAAFGLPTL
DKIRTEENTIQALVIAPTRELAVQSQEELFRFGRDKGVKVRSVYGGSSIEKQIKALRSGA
HIVVGTPGRLLDLIKRKALKLNNIETLILDEADEMLNMGFLEDIEAIISRVPEERQTLLF
SATMPDAIKRIGVQFMKDPEHVKIKAKELTNVNVDQYFIRVKEQEKFDTMTRLMDVDQPE
LSIVFGRTKRRVDELTRGLKLRGFRAEGIHGDLDQNKRLRVIRDFKNDQIDILVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGQSGQSITFVAPNEMGYLGIIENLTKK
RMKGLKPPTAQEAFQAKKKVALKKIERDFADEAIRANFDKFKGDAVKLAQEFTPEELALY
ILSLTVQDPETMPEVEIAREKPLPFKPSGGGFGGKGGKGGRGNRGRDNNRRGGYRGDRNR
DDRDGGRRDFKRKSKKNSRDFENRGNKRPHRTSSEKKNGFVIRNKGDK
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttacagatttaaacctatcagaagacatccaatcagctgttgtagctgccggt
tttgaaaagccatcacctatccaagagttgacgattccactcgctcttgaaggtaaggat
gttatcggtcaggcccaaactggtactggtaaaacagctgcctttggtttgccgacccta
gataaaattcgtacagaagaaaatacaatccaagcccttgtgattgccccaacacgtgag
ttggcagtgcaatctcaagaagagcttttccgttttggccgtgataagggcgttaaggtt
cgctcagtctacggtggctctagcattgagaaacaaatcaaggccctccgttcaggtgcc
cacattgtagtagggacaccaggtcgtctccttgaccttatcaaacgtaaggctcttaaa
ctcaataatatcgagactttgattttggatgaagctgatgaaatgcttaacatgggcttc
cttgaagacattgaagctatcattagccgagtaccagaagaacgtcaaacccttctcttc
tcagcaactatgcctgatgctatcaaacgtattggcgttcagttcatgaaagatcctgag
catgtgaaaatcaaggctaaagaattgaccaatgttaacgttgaccaatactttatccga
gtgaaggaacaagagaagttcgataccatgactcgtcttatggatgttgaccaacctgaa
ttgtcaatcgtctttggacgtaccaaacgtcgtgtggatgagttgacacgtggtttgaaa
cttcgaggtttccgtgcagaaggtatccacggtgaccttgaccaaaacaaacgtcttcgt
gttatccgtgacttcaagaacgaccaaatcgatatcttggttgccacagacgttgcggca
cgtggtcttgacatttcaggtgtcactcacgtctacaactatgatattccacaagaccca
gaaagctacgttcaccgtattggacgtacaggccgtgcaggccaatcaggtcaatcgatt
actttcgttgctccaaacgaaatgggttacttgggaatcatcgaaaacttgactaagaaa
cgcatgaaaggccttaagccaccaacagctcaagaagccttccaagctaagaagaaagtt
gcccttaagaaaattgaacgtgacttcgcggatgaagctatccgtgccaactttgacaag
ttcaagggcgatgcggttaaattggctcaagaattcacacctgaagaattggcgctttac
atcttgagcttgaccgttcaagacccagagacaatgccagaagtggaaattgcgcgtgaa
aaaccattgcctttcaaaccatcaggtggtggctttggcggtaaaggcggcaaaggtggc
cgtggcaaccgtggtcgcgataacaaccgtcgtggtggataccgtggcgaccgtaaccgt
gatgatcgagatggtggccgtcgtgacttcaaacgcaagtctaagaagaacagtcgtgac
ttcgaaaatcgtggcaacaaacgcccacaccgtacctcaagcgaaaagaaaaacggcttt
gttatccgtaacaagggtgataaataa
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