Streptococcus equinus: A6J79_01345
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Entry
A6J79_01345 CDS
T06203
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
seqi
Streptococcus equinus
Brite
KEGG Orthology (KO) [BR:
seqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seqi03400
]
A6J79_01345 (addA)
Enzymes [BR:
seqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A6J79_01345 (addA)
DNA repair and recombination proteins [BR:
seqi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
A6J79_01345 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
DEAD
AAA_25
Med11
Motif
Other DBs
NCBI-ProteinID:
ARC33197
LinkDB
All DBs
Position
complement(253540..257193)
Genome browser
AA seq
1217 aa
AA seq
DB search
MLTKAFLSPTEIKERIAQEAASDKERKLTPEQIEAIYSNGSNILVSASAGSGKTFVMVER
ILDMIGRGVGIDQLFISTFTVKAAGELKERLEKRLTEQLGQVETDEERAFLSDQIAKIGT
ADIGTMDAFTQKLVNQYGYLLGVSPIFRIMTDPAEQTLMKNEVYVDLFNDYMQGKDAQLF
QKLVRNFAGNGKTSKAFRDLVYDVYNFSQATAGPEKWLRQNLLKGQTDAKPDKAKVELLE
GLKDGLLADFLAFLRDHLGLAQREFAKAKYLNNVSDAISLLEGALANDQTDMEDLLKQLL
TLSGGTGLTNMTRPKDEELKTYKEAYNKTKNEFVAQLREIDTQLTVLEVLTKHNDDILPL
LELLQAFVLDFLDQYLQAKIQENAFEFSDIAHFAIRILEENPEVAASYRDRYHEVMVDEY
QDNSHTQERMLELLSNGHNRFMVGDIKQSIYRFRQADPQIFNGKFQLFLENPDAGKLILL
KENFRSQSEVLDATNGVFSHLMDQEIGDILYDKTHMLVAGSEKQKEPHPENETEVLIYNS
DEASVTPDEEGSDQPISSGEISLVIKEIISLHKQGVRFEDITLLAPTRNTYLDLMASFEE
HGIPLVPDEYKSSYLESLEVMIMLDTLRAINNPLNDYALVALLRSPMFNFNEDDLARIAV
QADEGQFYDKLLVACTKTGLHPEVVTQGLDAKLTLFTETLADWRDYSKWHSLYDLIWKIY
DDRFYYDYVSSLPRADQRQANLYALALRANAYEKTGFKGLSRFIGMIDKIISSGNDLEEV
TDLVPKNAVSLMTIHKSKGLEFKYVFVLQMNRKFIGHSRDGLSGKYIINRDKGLGIKYLA
DLKDQVNTNLPKLNVVLETLTFQENRREERRASISEEMRLLYVAMTRAEKKLYLVGKGSK
EKLTQQFGTDVENNRLPVALRDQIATYQDWVMALDTAFMRKDLKFTVRFVEAEELTPEAI
GQVEVKAAVDADDLSNNRQTEDIKRALTVLESVEKLNQLYAPAIDLPSVRTPSQLKAFYE
PVMDTEGVDIMDKKEEVHPLETTTSFELPDFGQKTKVTGAAVGSATHELMQRLILSDKVT
LQDLTQALSRVSADDQVKARVQLEKLLGFFDTELGKLILANRDKLRREAPFAMLAEDPAS
KEDFVVRGIIDGYLLLEDRIVLFDYKTDRFTHLSELKERYKGQMSLYAKALSQAYQIDKI
DKYLILLGGKDLEVVEV
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgttgactaaagcttttttaagtccaacagagattaaggaacgcattgcccaagaagca
gcttctgacaaggaacgcaagttaacacctgagcagattgaggccatttacagtaatggt
agcaatattcttgtgtcagcttcggccggatcaggaaaaacctttgtcatggttgagcgt
atccttgatatgattggacgtggcgttggtattgaccaactctttatctcaacctttacg
gtaaaggctgcaggtgagttaaaagagcgtctggaaaagcgtctgacagagcagttggga
caagttgagacggatgaagagcgtgcctttctttcagaccagattgccaaaattgggacg
gctgatattggaaccatggatgccttcacccagaaattggtcaatcagtatggctatctc
ctgggggtgtcacctattttccgcattatgacagatcctgctgagcagacactcatgaaa
aatgaggtttatgttgatctcttcaacgattacatgcaagggaaggatgcccaacttttc
caaaaattggtccgcaacttcgctggaaatggtaagactagtaaggccttccgtgatcta
gtttacgatgtctataacttttctcaggctactgcaggtcctgaaaaatggctacgtcag
aatctcttaaaagggcagacggatgccaagccagacaaggctaaagttgagcttttagag
ggtctcaaagatggcttgttagctgatttcttagccttcttaagagaccatttaggccta
gctcagcgtgaatttgccaaggccaagtatctgaataatgtgtcagatgccattagcctt
ctggagggagccttggccaatgaccaaaccgatatggaggacttgctcaaacaactcttg
actctgtcaggagggactggcttgacaaatatgacccgtcctaaagatgaggaactcaag
acctacaaggaagcttacaacaagaccaaaaatgagtttgtggcccagttgcgtgagatt
gatacccaactaacggtcctcgaggttttgaccaagcataatgatgacattctacctctg
ttagagctgcttcaggcctttgtgcttgattttttagaccagtatttacaggccaagatt
caggaaaatgcctttgaattctcagatattgcccactttgccatccgtattttggaggaa
aatccagaggtggcagccagctaccgtgaccgttaccatgaagtaatggtagacgagtat
caagacaatagccatacccaagaacgcatgttggagctcctctctaacggccacaaccga
ttcatggtgggagatatcaagcaatccatctatcgtttccgtcaggcggatcctcagatt
tttaatggcaagttccagcttttccttgaaaatccagatgcaggtaagctaattctcctt
aaagagaacttccgtagccaatctgaagttcttgatgcgaccaatggtgttttcagccac
ctcatggatcaggaaatcggagatatcctctatgacaagacacacatgttggtagcaggt
agcgagaagcaaaaagagccccatcctgaaaatgagactgaagttctgatttacaatagt
gatgaagcaagtgtgactcctgacgaggaaggttctgatcaacctatcagtagtggtgag
atttccctggttatcaaagaaattatcagtcttcataagcagggtgtacgatttgaggac
attaccctcctagcaccaacccgcaacacctatctggacttgatggcaagcttcgaggag
cacggaattcctttggttcctgacgagtacaagtcaagctacctagagtcgctagaagtt
atgattatgttggatactcttcgtgccatcaataatcctcttaatgactatgccctcgtt
gccctccttcgttcaccgatgtttaatttcaacgaggatgatttggctcgtattgctgtc
caggctgacgaaggacaattctatgacaagcttcttgtagcatgcactaaaacagggctt
catccggaagttgtcacacaaggacttgatgccaagttgactcttttcactgagactctg
gcagattggcgtgattacagtaagtggcactcgctctacgacctcatttggaagatttac
gacgatcgtttctattatgattatgttagcagtcttccacgagccgatcaacgtcaggct
aatctctacgcccttgccttgcgtgctaatgcctatgaaaagacaggctttaagggactt
tctcgttttatcggtatgattgacaagatcatttctagcggtaacgacctagaggaagtg
acagacttggttcctaaaaatgccgttagcctcatgactattcacaagtccaaggggcta
gaattcaagtatgtttttgtcttgcagatgaatcgcaagttcattggtcacagtagggat
ggactaagtggtaagtatattatcaaccgtgataaaggacttggcattaagtacctagct
gaccttaaagaccaggtaaacaccaatttgcccaagttaaatgttgttctagagacccta
accttccaggaaaatcgtagggaagagcgcagggcaagtatctcagaagagatgcgtctg
ctctatgttgcaatgactcgtgcagagaaaaaactctacctagttggtaagggtagtaag
gaaaaattaacccagcaatttggtacggatgtcgaaaataatcgcctaccagtagctctc
cgtgaccaaatcgctacttatcaggattgggttatggctttggataccgcctttatgaga
aaggatctcaagtttactgttcgctttgttgaggctgaggagttgactccagaggctatt
ggtcaggttgaagttaaagcagcagtagatgctgatgatctatctaacaatcgtcagacg
gaagatattaagcgtgccctaactgtcttagaaagtgttgaaaaactcaatcaactttat
gcaccagcgattgacctgccatctgtgcgtactccgagccagctcaaagccttctatgaa
cctgtcatggataccgaaggggtggatattatggacaagaaagaggaagtgcaccctctt
gagactaccactagctttgagcttccagattttgggcaaaaaacgaaggtcactggagct
gcagttggttcagccacccatgaactcatgcaacgcttgattctttctgacaaggtgacc
ctccaagatttgacacaggccttgagtcgagtatcggcagatgatcaagtcaaggcgcgt
gtacagttagaaaagctactaggcttctttgacaccgaacttgggaagctcattttagct
aaccgtgataagttgcgtcgtgaagcgccatttgccatgttggcagaagatcccgctagt
aaagaagactttgtcgtccgtggtatcattgatggctaccttcttcttgaagaccgtatt
gtcctctttgactataagacggaccgcttcactcatcttagtgagcttaaggaacgttac
aaagggcaaatgagcctctatgctaaagccctcagtcaagcctatcaaatagataagatt
gataaataccttattctcctaggtggaaaagacttggaagtcgtagaagtataa
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integrated database retrieval system
