Streptococcus equinus: A6J79_01770
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Entry
A6J79_01770 CDS
T06203
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
seqi
Streptococcus equinus
Brite
KEGG Orthology (KO) [BR:
seqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seqi03019
]
A6J79_01770
Messenger RNA biogenesis [BR:
seqi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A6J79_01770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
ARC33272
LinkDB
All DBs
Position
complement(350522..351463)
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AA seq
313 aa
AA seq
DB search
MKINQMKKDEYFEGFYLIKRAEVRKTRAGKDYIAFTFQDDTGEISGNLWDAQPYNVEEFT
AGKVVHMEGRREVYNNTPQVNQITLRLPTFGEPNDPADFKEKPPVNPSEVREYLEQMIFK
IEEATWQRVVRALYRKYNKEFFTFPAAKTNHHAFESGLAYHTATMVRLADSIGDIYPELN
KSLLFAGIMLHDLAKVIELTGPENTEYTVRGNLIGHIALIDEEITKVLVELNIDDTREDV
VVLRHVILSHHGQLEYGSPVRPRIMEAEIIHMIDNLDASMMMMTTALNLVGPGEMTNRLF
AMDNRSFYKPKFD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaagattaatcaaatgaaaaaagacgagtattttgaaggtttttatctgattaagcgt
gcagaggtacgtaagacaagagcaggaaaggattatattgcctttacttttcaggatgat
actggagagatttcaggaaacctgtgggatgctcagccttataatgtcgaagaatttacc
gcaggtaaagtagtgcatatggaggggcgtcgagaagtttataataatactcctcaggta
aaccaaataaccttacgcttgcctacatttggtgagccaaatgatccagctgatttcaaa
gagaaaccaccggtaaatccttctgaagtacgcgaatacctagagcaaatgattttcaag
attgaggaagcaacttggcagcgtgttgttcgtgctctttatcgaaagtataataaagag
tttttcacttttccggctgctaaaacaaatcaccatgcttttgaaagtggactagcctat
catacggctactatggttcgcctagcggacagcattggagatatttatccagagctcaat
aagagtctactttttgcagggattatgcttcatgatttagctaaggttattgaacttact
ggtcctgaaaatactgagtatacggttcgtgggaacttaattggtcatattgccttgatt
gatgaagaaattaccaaggtccttgtggaacttaatattgacgatacgcgtgaggatgtc
gttgttttgcgtcatgtcattctcagccaccacggacaactggagtatggtagcccagtt
cgcccgcgtattatggaagcagaaattattcatatgattgataatcttgatgccagtatg
atgatgatgacgacagcccttaacctagtaggaccaggagaaatgacaaatcgtctcttt
gctatggataatcgttccttctacaagccaaaatttgattaa
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