Streptococcus equi subsp. zooepidemicus CY: Q426_02900
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Entry
Q426_02900 CDS
T03306
Name
(GenBank) single-stranded DNA exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sequ
Streptococcus equi subsp. zooepidemicus CY
Pathway
sequ03410
Base excision repair
sequ03430
Mismatch repair
sequ03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sequ00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Q426_02900
03430 Mismatch repair
Q426_02900
03440 Homologous recombination
Q426_02900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sequ03400
]
Q426_02900
DNA repair and recombination proteins [BR:
sequ03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Q426_02900
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Q426_02900
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Q426_02900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AIA67397
LinkDB
All DBs
Position
578643..580853
Genome browser
AA seq
736 aa
AA seq
DB search
MITSKYQWTIADKEPDAGFFKLAQAKGLSQTAAKLIYDRGVHTEEELTSFLTADLSQLHD
PYLLNDMEKAVHRIRQAIEGFERILVYGDYDADGMTAASIVKETLEMMGAEPLVYLPNRF
TDGYGPNQSVYKYFIEQEQVSLIITVDNGVSGHEAIAFAQAQGVDVIVTDHHSLPAELPE
AFAIIHPEHPAAAYPFQKLAGCGVAFKLASALLETVPVDFLDLVAIGTIADMVSLRGENR
ILVKNGLAVLKETERLGLQELMKLSEVDLTHFDEDVIGFKLAPQLNALGRLDDPNPAIDL
LTGFDDEELHELALMISSKNEERKALVQEIFAQAMAMVDLDKPVQVLAKSGWHPGVLGIV
AGRIMEEIGQTVLVLTIDEGLAKGSARSLESINIFEALNSNRSLFTAFGGHEGAAGMTLP
SDRLEELSELLCQYVTDRGHAGQKKNTLLINGELDLEALSVDSLNKLLLLAPFGMDNKKP
VFYLKDFTIKQARTIGQQQSHLKFKVSKGAAEADVLAFGQGHLIQEYQQSQGLELAVSLA
INHWRGHTSLQLMLVDARVTGVQLFDIRARTARAPEHIPTALEDQQAKVVVIDEVPDDID
ALKGIFRHREFEAIYFKNHIKRPYYLTGYGSREQFAKLYRTIYQYPEFDLRHKLTLLSDY
LKIEKILLVKMIQIFEELGFVVIEDGLMRVKTDAPKRSIADSVIYQQLKELVKFQELMAL
GSPQEIYQYLMTSEEK
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgattacgtccaaatatcagtggaccatagctgataaggagccagatgctggcttcttt
aagctagctcaggcaaagggacttagtcagacagctgcaaagctcatctatgaccgaggt
gttcataccgaagaggagcttaccagctttttgacagctgacctatcacagcttcatgac
ccttatttgctaaatgatatggaaaaagctgttcatcgcattcgtcaggccattgaaggg
tttgagaggattttggtctacggagattatgatgcagatggcatgacagcggcgtctatt
gtcaaggaaacgctggaaatgatgggagcagagcctcttgtttatttacctaatcgcttt
acagatggctatggtcccaatcaaagtgtttacaagtatttcatcgagcaagagcaggtt
tcgctgattattaccgttgacaatggtgtttcaggccatgaagcgattgcctttgcgcaa
gcacagggggtagatgttattgtaacagaccaccacagcctgccagcagagctacctgag
gcctttgctattattcaccctgagcacccagctgctgcttatccctttcaaaaactagct
ggctgtggcgtcgccttcaagttggcttcagctctgctagagacggttccagtagacttt
ttagatttggttgctattgggacaattgctgacatggtcagcctacggggtgaaaaccgt
atccttgtcaaaaacgggctagctgttctaaaagagacagaaagattaggcttgcaggag
ctgatgaagctttcagaggttgacttaacacactttgatgaagatgttattggctttaag
cttgctccacagctcaatgctctagggcgtctcgatgatccaaatccggctattgatcta
ttgacaggctttgatgacgaagagcttcatgagcttgccttgatgattagcagtaaaaat
gaggaaagaaaggccttggtacaagagatttttgctcaagcaatggctatggtggatcta
gacaagcctgtgcaggttttagctaagtctggctggcacccaggagttttggggattgta
gctggtcggatcatggaggagattgggcagactgttcttgttttgactattgatgagggg
ctagcaaagggatcagccagaagcttagagagcattaatatctttgaagcacttaatagc
aataggagcttatttacagcctttggtggtcatgagggggcagcaggcatgactctgcca
tctgatcgcttagaggagctatcagagctactttgccagtatgtgacagacagaggacac
gctggtcaaaagaaaaacactttattgatcaatggtgaattggacttagaagcattgagt
gtagatagtctgaacaagctgctgcttctagcaccctttggcatggataataaaaagcct
gttttttacttaaaggattttaccattaagcaggcaaggaccattggtcagcagcaaagt
cacttgaaattcaaggtcagtaaaggagctgctgaggctgatgtcttggcctttggtcag
ggacatctgatacaggagtaccagcaatcacagggcttggaattagcggttagtcttgcg
atcaatcactggcgaggtcatactagcctgcaattaatgctggttgacgctagagtgact
ggggtgcagctgtttgatattcgagcaaggactgctagggcacctgagcatattcctaca
gctcttgaggaccagcaggccaaggttgttgtcatagatgaggttcctgacgatattgat
gccttgaaaggcatttttagacatcgggaatttgaagcgatttactttaaaaatcatatt
aagcgcccttattacctaacaggctatggcagtagagagcaatttgccaagctttatagg
accatctatcaatacccagaatttgatcttcgccataagctgaccctgctaagtgattac
ctcaagattgaaaaaatcctcttggtcaaaatgatacaaatttttgaggagttaggcttt
gtagtaatcgaagatgggctgatgagggtaaagactgatgccccaaaacgtagcatcgct
gacagtgtcatttaccaacagctaaaagagctggtaaagtttcaagagcttatggccttg
ggcagtccgcaggagatttatcagtatttaatgactagtgaagagaaatag
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