Streptococcus equi subsp. zooepidemicus CY: Q426_07815
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Entry
Q426_07815 CDS
T03306
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
sequ
Streptococcus equi subsp. zooepidemicus CY
Pathway
sequ03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sequ00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Q426_07815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sequ03019
]
Q426_07815
Messenger RNA biogenesis [BR:
sequ03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Q426_07815
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
SIS_2
Motif
Other DBs
NCBI-ProteinID:
AIA68120
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Position
1575738..1577420
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AA seq
560 aa
AA seq
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MTNISLRPNEVGVYAIGGLGEIGKNTYGIEYQDEIIIVDAGIKFPEDDLLGIDYVIPDYS
YIVDNLERVKALVITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRDAV
LYEINHNTELTFKHMSVTFFKTTHSIPEPLGIVIHTPQGKVICTGDFKFDFTPVGDPADL
HRMAALGKDGVLCLLSDSTNAEIPTFTNSEKVVGQSIMNIIEGIHGRIIFASFASNIYRL
QQAAEAAVKTGRKIAVFGRSMEKAIVNGIELGYIKVPKGTFIEPNEIKHYHASEILIMCT
GSQGESMAALARIANGTHRQVSLQPGDTVIFSSSPIPGNTVSVNKLINTIQEAGVDVIHG
KVNNIHTSGHGGQQEQKLMLSLIKPKYFMPVHGEYRMQKVHAGLAVDIGIPEENIFIMEN
GDVLALTSDSARIAGHFNAQDIYVDGNGIGDIGTAVLRDRRDLSEDGVVLAVATVDFETQ
MILAGPDILSRGFIYMRESGELIRESQRVLFNAIRIALKNKDASIQSVNGAIVNALRPFL
YEKTEREPIIIPMVLTPDSQ
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatatcagtttaaggcctaatgaggttggggtttatgcgattggtggtctggga
gagatcggcaaaaacacctacggtattgagtatcaagatgaaatcatcattgtcgatgcc
ggtatcaaattcccagaggacgatttgctagggattgactatgttatccccgattactct
tatattgttgacaatttggagcgcgtcaaggctcttgtgattactcatggtcatgaggat
catattggcggtattccttttttactaaagcaagctaatgtgcctatatatgcaggccct
ttagctctagctcttatccgaggaaagctggaggagcatggtctcttacgcgatgctgtg
ctctatgagattaatcacaataccgagctcacctttaagcatatgagcgttaccttcttt
aaaacaactcactctattccagagccacttgggattgttatccacaccccacaagggaaa
gtcatctgtactggcgacttcaagtttgactttacacctgttggtgatccggctgatcta
catcgcatggctgctcttggtaaggacggggttctttgtctattgtccgattcgacaaat
gccgagataccaacctttacgaattctgaaaaggtcgttggccagtcaatcatgaacatt
attgaaggcattcatggacgtatcatttttgcttcctttgcttcaaatatctaccgcttg
cagcaggctgcagaagccgctgttaagacaggtcgtaagattgctgtatttggccgttcg
atggaaaaggccattgttaacggtatcgagcttggctacatcaaggtcccaaagggaacc
tttattgagcctaatgagattaaacattaccacgctagtgagattttgatcatgtgtacc
ggcagtcaaggggagtctatggccgcccttgctaggattgccaatggtacccacagacag
gtcagcttacagcctggagacactgttatcttttcatcaagtccaattcctggtaatacc
gtcagcgtcaataagctaatcaatacgattcaggaggctggagttgacgttattcatgga
aaggtcaacaatatccacacctccggtcatggtggccagcaggagcaaaagctaatgctt
agccttattaagccaaaatactttatgcctgtccatggtgaataccgtatgcagaaggtt
catgctgggcttgctgttgatattgggattccagaggaaaatatctttatcatggaaaat
ggtgacgtattggccttgaccagtgatagcgctcgtatagccggtcatttcaatgctcag
gacatttatgtagatggcaatggcattggagatattgggacagcagtccttcgcgatcgt
cgtgatctttcagaggacggggttgtccttgcagtggcgactgttgattttgagacacag
atgatcttagccggaccagatattcttagtcgcggttttatctacatgcgcgagtcaggc
gagctcatcagagagagtcagcgcgtgcttttcaatgcgattcgtatcgctctgaaaaat
aaggacgctagtatccagtctgtcaatggtgctatcgttaatgcgcttcgtcctttcctt
tacgaaaagacagagcgcgagcctattatcattccaatggttctaacacctgatagccaa
tag
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