Streptococcus equi subsp. zooepidemicus CY: Q426_08770
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Entry
Q426_08770 CDS
T03306
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sequ
Streptococcus equi subsp. zooepidemicus CY
Pathway
sequ03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sequ00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Q426_08770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sequ03021
]
Q426_08770
03400 DNA repair and recombination proteins [BR:
sequ03400
]
Q426_08770
Enzymes [BR:
sequ01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Q426_08770
Transcription machinery [BR:
sequ03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Q426_08770
DNA repair and recombination proteins [BR:
sequ03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Q426_08770
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Peptidase_M23
CCDC122
CM_2
Motif
Other DBs
NCBI-ProteinID:
AIA68247
LinkDB
All DBs
Position
complement(1761326..1764961)
Genome browser
AA seq
1211 aa
AA seq
DB search
MVDVNRFKSMQITLASPSKVRSWSYGEVKKPETINYRTLKPEREGLFDEVIFGPTKDWEC
ACGKYKRIRYKGIVCDRCGVEVTRAKVRRERMGHIELKAPVSHIWYFKGIPSRMGLTLDM
SPRALEEVIYFAAYVVIDPKDTPLEPKSLLTEREYREKIQEYGHGSFIAKMGAEAIQDLL
KRVDLVTEIAELKEELKTATGQKRIKAVRRLDVLDAFHKSGNKPEWMILNILPVIPPDLR
PMVQLDGGRFAASDLNDLYRRVINRNNRLARLLELNAPGIIVQNEKRMLQEAVDALIDNG
RRGRPITGPGSRPLKSLSHMLKGKQGRFRQNLLGKRVDFSGRSVIAVGPTLKMYQCGVPR
EMAIELFKPFVMREIVAREFAGNVKAAKRMVERGDERIWDILEEVIKEHPVLLNRAPTLH
RLGIQAFEPVLIDGKALRLHPLVCEAYNADFDGDQMAIHVPLSEEAQAEARLLMLAAEHI
LNPKDGKPVVTPSQDMVLGNYYLTMEDAGREGEGMVFKDKDEAVMAYRNGYVHLHSRVGI
AVDSMPSKPWEDSQRHKIMVTTVGKILFNDIMPEDLPYLQEPNNANLTEGTPDKYFLEPG
QNIQEVIDSLPLNVPFKKKNLGNIIAETFKRFRTTETSAFLDRLKDLGYYHSTLAGLTVG
IADIPVIDNKAEIIEAAHHRVEEINKAFRRGLMTDDDRYVAVTTTWREAKEALEKRLIET
QDPKNPIVMMMDSGARGNISNFSQLAGMRGLMAAPNGRIMELPILSNFREGLSVLEMFFS
THGARKGMTDTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLLIRAITDGKEVTETL
EERLQGRYTRKSVKHPETGEVLIGADQLITEDMARKIVDAGVEEVTIRSVFTCATRHGVC
RHCYGINLATGDAVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVASNTDITQGLPRIQE
IFEARNPKGEAVITEVKGTVIEIEEDASTRTKKVYVQGKTGMGEYVVPFTARMKVEVGDE
VNRGAALTEGSIQPKHLLEVRDTLSVETYLLAEVQKVYRSQGVEIGDKHVEVMVRQMLRK
VRVMDPGDTDLLPGTLMDIADFTDANKEIVISGGIPATSRPVLMGITKASLETNSFLSAA
SFQETTRVLTDAAIRGKKDHLLGLKENVIIGKIIPAGTGMARYRNIEPQAINEVEVIEGA
EATEEPAIIEE
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
gtggttgacgtaaatcgttttaaaagtatgcaaatcacattagcttcaccaagtaaggtc
cgttcatggtcctatggtgaagttaaaaaacctgaaacaatcaactaccgtacattaaaa
ccagaacgtgagggtctttttgacgaagtcatttttgggccaaccaaggattgggagtgt
gcgtgtggcaaatataaacgtattcgctataaaggtattgtctgtgaccgttgtggggtt
gaggtaactcgtgcaaaggttcgtcgtgaacgcatgggacacattgagctaaaggcacct
gtgtcacatatctggtattttaaagggatcccatctcgcatgggcttgactcttgatatg
agtccgcgtgcccttgaagaggttatctactttgccgcttatgtggttattgatccaaag
gatacaccgcttgagcccaaatcactattgacagagcgtgaatatcgtgaaaaaatccaa
gaatatggacatggctcattcatcgctaagatgggggcagaggctattcaggatctccta
aagcgtgttgatttggtcacagaaattgctgagctaaaggaagaattaaaaacagcaaca
ggccaaaagcgtatcaaggctgttcgtcggttagatgtgcttgatgcctttcataaatca
ggtaataagccagaatggatgatcctgaatatcttgccggtcattccaccagatcttcgt
cctatggtgcaattggacggtggtcgctttgcagcctcagacttgaatgacctttaccgt
cgtgtcattaatcgtaataaccgtttagcacgtttgctggagcttaatgcgcctggtatc
attgtgcaaaatgaaaagcgtatgctgcaagaggcggttgatgctttgattgataatggt
cgtcgtggtcgtcctattacaggacctggtagtcgtccgctgaaatccttgagccacatg
cttaagggaaaacaaggacgttttcgtcaaaacctgcttggtaagcgtgttgacttctca
ggtcgttcagttattgctgtaggtccaacgcttaaaatgtaccaatgtggtgtgccacgt
gagatggctattgagcttttcaagccatttgtgatgcgtgagattgttgcccgcgaattt
gccggcaacgtcaaagcagctaagcgtatggttgagcgtggcgacgagcgtatctgggat
attctagaggaggtcatcaaggaacacccagtgcttcttaaccgcgcacctactcttcac
aggcttggtattcaggcctttgagccagttcttattgatggtaaggctcttcgtcttcac
ccacttgtatgtgaggcctacaatgctgactttgacggagaccaaatggccattcacgtg
ccgctgtcagaggaagcacaggcagaggctcgtttgttgatgcttgctgccgagcatatt
cttaaccctaaggacggtaagccagttgtaacaccttctcaggatatggtgctaggaaac
tactacctaacaatggaagatgctggtcgtgaaggcgaaggtatggtctttaaggacaag
gacgaagcggtaatggcttaccgtaatggctatgttcaccttcatagtcgtgttggtatt
gctgttgacagtatgccaagcaagccttgggaggatagtcaaagacacaaaatcatggtg
acaacggtcggtaagatcttgtttaatgacatcatgccagaggaccttccttacctccaa
gagccaaataatgctaacctgacagagggcactccagataaatatttcttggagccaggt
cagaatattcaggaggttattgatagcttaccgctcaatgtgccattcaagaagaaaaat
cttggtaacatcattgcggaaaccttcaagcgtttccgtacaacagaaacatcggccttt
cttgaccgcctgaaggaccttggctactatcattcaacccttgccggcttgacggttggg
atcgctgatattccggttattgacaacaaggctgagatcatcgaggctgctcaccatcgt
gtagaagaaattaataaggccttccgtcgaggcttgatgacagatgatgaccgctatgtt
gcagtcacaacaacgtggcgtgaagcaaaagaagcccttgagaagcgtttgattgaaaca
caggatcctaagaacccaatcgttatgatgatggactcaggagcgcgtggtaacatctct
aacttctcacagctggctggtatgcgaggcttgatggctgcccctaacggccgtattatg
gagcttcctatcctgtctaacttccgcgaaggtttgtctgttttggaaatgttcttctca
actcatggagctcgtaagggtatgactgatacggctcttaagacagctgactcaggctat
ctgacacgtcgtttggttgatgttgcgcaagatgtcatcattcgtgaggacgattgtggt
acagaccgaggccttcttattcgtgctattacagatggtaaggaggtcactgaaacactt
gaggagcgcttgcagggtcgatacactcgtaaatcagtcaagcaccctgagactggtgag
gtactgattggtgctgaccaattaatcactgaggacatggctcgcaagattgttgatgct
ggtgttgaagaggttaccattcgctcggtatttacctgtgctactcgtcatggtgtttgt
cgtcactgttatggtatcaacctagcaacaggtgatgcggttgaggttggtgaggctgtt
ggtactatcgctgcccaatctatcggtgagcctggtactcagctgaccatgcgtaccttc
cacacaggaggggttgcctcaaataccgatatcacgcagggtcttcctcgtatccaagaa
atctttgaagcgcgcaaccctaaaggggaagcagttatcacagaggttaagggtactgtt
attgagattgaagaggacgcatcaactcgtactaagaaggtctacgttcaaggtaaaaca
ggcatgggtgaatatgtcgtgccatttacagcgcgtatgaaggttgaggttggtgatgag
gtcaatcgtggagctgcccttacagaagggtcaatccagcctaagcacctccttgaggtt
cgtgataccttgtcagttgagacctacttgcttgctgaggttcaaaaggtttaccgcagc
caaggggtagaaatcggggacaagcacgttgaggttatggttcgtcaaatgcttcgcaag
gtacgtgtcatggatccaggtgatacagatcttctgccaggaaccttgatggacattgca
gacttcacagatgccaacaaggagattgttatctccggtggtattcctgcaacctctcgt
ccagtgcttatgggaatcacaaaagcctcacttgagactaattcattcttgtcagcagct
tccttccaggaaactactcgcgtgctgacagacgctgctatccgaggcaaaaaagaccat
ctattggggcttaaggaaaatgttatcatcggtaagatcattccggcaggtactggtatg
gctcgttaccgtaacattgaaccacaagctatcaatgaggtcgaggttatcgaaggagct
gaagctacagaagagccagcaattattgaggaataa
DBGET
integrated database retrieval system
