Staphylococcus epidermidis RP62A (MRSE): SERP0122
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Entry
SERP0122 CDS
T00229
Name
(GenBank) DNA polymerase III, delta prime subunit, putative
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
ser
Staphylococcus epidermidis RP62A (MRSE)
Pathway
ser03030
DNA replication
ser03430
Mismatch repair
ser03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ser00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SERP0122
03430 Mismatch repair
SERP0122
03440 Homologous recombination
SERP0122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ser03032
]
SERP0122
03400 DNA repair and recombination proteins [BR:
ser03400
]
SERP0122
Enzymes [BR:
ser01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SERP0122
DNA replication proteins [BR:
ser03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SERP0122
DNA repair and recombination proteins [BR:
ser03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SERP0122
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
MIB_M2
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
AAW53459
UniProt:
Q5HRS1
LinkDB
All DBs
Position
114318..115244
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AA seq
308 aa
AA seq
DB search
MDEQQQLANAYHSNKLSHAYLFEGDDAQTMKRVAIHFTKLILCNNSNQCELKVDTFNHPD
FSYVSSDENTIKKEQIEKLVHHMNQLPIEGQYKVYIIEDFEKLTVQGENSILKFLEEPPD
NTIAILLSTKPEQILDTIHSRCQHVYFKPIDKRQFIERLVEMSIARPVAEMLSTYTTQIE
AASSLNEEFDLVTLRKSIIRWCQLILSNKAMALIGVIELLKQAKNRKLQLLTLSAVNGFF
EDIMHAKIEMDNYYTFSDLTEEIENYANQLTFNQLILMYDQITEAHKKLNQNVNPTLVFE
QIVIKGVI
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacaacaacagttagctaacgcatatcattctaacaaattgtcacatgcatat
ttgtttgagggtgatgatgcacaaacgatgaaacgtgtcgcaatccattttactaaatta
attctttgtaataatagtaatcaatgcgaactgaaagttgatacttttaatcatcctgac
ttttcatatgtgtcttctgatgaaaatacaattaaaaaagaacaaattgaaaaacttgtt
catcatatgaaccaactacctattgagggtcaatataaagtatatattattgaggatttt
gaaaaattaactgttcaaggggaaaatagtatactaaaatttttagaagagccccctgat
aatacaattgcgatacttttatcaacgaaaccggaacaaatattagacactatacattca
agatgtcagcatgtatattttaagcctattgataagcggcagtttatagagcgtttagta
gagatgtcaatagcaagaccggtagcagaaatgctaagtacctatacaactcaaatagaa
gcagcatcgtcgttaaatgaggaatttgatttagttactttaagaaaatcaatcatcaga
tggtgtcaattaatattatctaataaagctatggctcttataggtgtcattgagttatta
aaacaagctaagaatcgtaaattacaattacttactttatcagccgtcaatggctttttc
gaagatataatgcatgcaaagatagaaatggataattattatacatttagtgatttaact
gaagaaattgaaaattatgcaaatcaattaacttttaatcaattaatcctcatgtatgat
cagattactgaagcgcataaaaagttaaatcaaaatgttaatccaacacttgtttttgaa
caaatagtaataaaaggtgtgatttaa
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