Staphylococcus epidermidis RP62A (MRSE): SERP0384
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Entry
SERP0384 CDS
T00229
Symbol
recQ-1
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ser
Staphylococcus epidermidis RP62A (MRSE)
Pathway
ser03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ser00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SERP0384 (recQ-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ser03019
]
SERP0384 (recQ-1)
03400 DNA repair and recombination proteins [BR:
ser03400
]
SERP0384 (recQ-1)
Enzymes [BR:
ser01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SERP0384 (recQ-1)
Messenger RNA biogenesis [BR:
ser03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SERP0384 (recQ-1)
DNA repair and recombination proteins [BR:
ser03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SERP0384 (recQ-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
HRDC
RecQ_Zn_bind
Cas3-like_C_2
GH123_cat
Motif
Other DBs
NCBI-ProteinID:
AAW53765
UniProt:
Q5HR11
LinkDB
All DBs
Position
383163..384941
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AA seq
592 aa
AA seq
DB search
MQETLSHYFGYKSFRPGQEEIITKILNHQHTLGVLPTGGGKSICYQVPGLMQGGTTIVIS
PLISLMKDQVDQLQAMGIQAAYLNSSLTHKQQKEIEEQIKRGAIQFLYVAPERFENTFFL
NLLRKIEIPLIAFDEAHCISKWGHDFRPSYQSVIQKVFTLPQNFTIVALTATATAEVQQD
IMSKLSIGQNDVVKTSTKRRNLIFKVNPTYQRQKFVVDYVANHEGQAGIIYCSTRKQVEE
LHEALNSEKIKSTIYHAGLTNKERIEAQNDFLYDRVEVVIATNAFGMGIDKSNVRYVIHY
NMPGDLESYYQEAGRAGRDGLKSECILLFSERDKGLHEYFITVSQADDDYKDKMGEKLTK
MIQYTKTKKCLEATIVHYFEPNENLEECNQCSNCIQENKTYDMTREAKMIISCIARMKQQ
ENYSVIIQVLRGEVTDYIKHHHYNELTTHGLMKNYTTSELSHLIDELRFKGYLNENDEIL
MCDTSVKQLLNNHTKVYTTPFKQKTKEKVFINTVEGVDRALYRELVDVRKQLSDKLGIAP
VSIFSDYTLEEFAKRKPESKQEMIAIDGVGSYKLKHYCPKFIETIQSYKTRI
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagactttatcgcattattttggttataagtcatttcgaccaggacaagaagaa
attataactaaaatattaaatcatcagcatacactgggggtactacctaccggtggcggt
aaatcgatatgctatcaagtaccaggtttaatgcagggtggcacaactattgttataagt
ccacttatttctttgatgaaagaccaagttgatcaactacaagcaatgggaattcaagct
gcatatttgaatagtagtttgactcataaacaacaaaaagagattgaagagcaaataaag
cgtggtgccattcagtttttatatgtagctccagagcgctttgaaaatactttttttcta
aatttattacgtaaaatagaaataccccttatcgcttttgatgaagcacactgtatatcg
aagtggggacatgattttagacctagttaccaaagtgtcatacaaaaagtttttacctta
cctcaaaacttcacaatagttgcacttacagctacggcaactgctgaagttcaacaagat
atcatgtctaagttatcaattggacaaaatgatgttgtcaaaacaagtactaaaagacgc
aatttaatcttcaaagtcaatccgacttatcagcgacaaaaatttgttgtggattatgtt
gcaaatcatgaaggacaggcaggaatcatttattgttccactcgtaagcaggtagaagaa
ttacacgaagctctaaatagtgaaaaaattaagagcacaatttatcatgctggtttaacg
aataaagagagaattgaggcgcaaaatgatttcttgtatgatcgtgtagaggttgtcatt
gcgacaaatgcatttggtatgggtattgataaatcaaatgtacgttatgtcattcactat
aacatgcctggagatttggaatcttactatcaggaagctggacgcgcgggacgtgatggt
ttaaaaagtgagtgtatccttttgtttagtgaacgagataagggattacatgagtatttt
attactgtatcccaagctgatgatgactataaagataaaatgggcgaaaaattaacgaaa
atgattcaatataccaaaacgaaaaagtgtttagaagcgacaattgttcattattttgaa
cccaatgaaaatttagaggaatgcaatcaatgtagtaattgtatacaggaaaataaaacg
tatgatatgactcgtgaagcgaaaatgattattagctgtattgctcgaatgaagcaacag
gaaaattatagtgttattatacaagttttacgtggagaagtgacagattatataaaacac
catcattataatgaattaacgacacatgggttgatgaaaaattatacaacatctgagtta
tcacacttaattgatgagctacgtttcaaaggatatttaaatgaaaatgatgaaattctt
atgtgtgatacatcagtgaaacaattactaaataatcataccaaggtttataccactccg
ttcaaacaaaaaactaaagagaaggtatttatcaacactgttgaaggtgtggatagagcg
ttatatcgtgagcttgttgatgtacgtaaacagctaagtgataaacttggaatagcacct
gtaagtatattttctgattacacgctcgaagaatttgctaagcgtaaacctgaatcgaaa
caagaaatgattgctattgatggtgtaggtagttataaattaaagcattattgtcctaag
tttatcgaaaccatacaaagctataaaactagaatataa
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