Staphylococcus epidermidis RP62A (MRSE): SERP0427
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Entry
SERP0427 CDS
T00229
Symbol
uvrA
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
ser
Staphylococcus epidermidis RP62A (MRSE)
Pathway
ser03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ser00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SERP0427 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ser03400
]
SERP0427 (uvrA)
DNA repair and recombination proteins [BR:
ser03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SERP0427 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SERP0427 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
nSTAND1
AAA_29
AAA_21
AAA_16
RsgA_GTPase
AAA_23
nSTAND3
AAA_33
DnaJ_CXXCXGXG
AAA_22
NACHT
cobW
AAA_24
Viral_helicase1
SLFN-g3_helicase
BCA_ABC_TP_C
Motif
Other DBs
NCBI-ProteinID:
AAW53841
UniProt:
Q5HQW9
LinkDB
All DBs
Position
429809..432643
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AA seq
944 aa
AA seq
DB search
MKGPSIVVKGARAHNLKGVDIELPKNKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMDKPDVDTIEGLSPAISIDQKTTSKNPRSTVATVTEIYDYIRLLYARVGKP
YCPYHGIEIESQTVQQMVDRILELEERTKIQLLAPVISHRKGSHEKLIEDIGKKGYVRLR
VDDEIVDVNEVPQLDKNKNHTIEVVVDRLVVKDGIETRLADSIETALELAEGNLTVDVIN
GEELKFSENHACPICGFSIGELEPRMFSFNSPFGACPTCDGLGQKLKVDLDLVIPDKNKT
LNEGAIEPWEPTSSDFYPTLLKRVCEVYKINMDKPYKKLTDRQKNILMNGSGEKEIEFTF
TQRNGGTRKRKMVFEGVVPNIDRRYHESPSEYTREMMSKYMTELPCETCHGKRLSKEALS
VYVGDYNIGEVVEYSIKNALYYFENLKLSDQDKSIADQILKEIISRLSFLNNVGLEYLTL
DRSSGTLSGGEAQRIRLATQIGSRLTGVLYVLDEPSIGLHQRDNDRLINTLKEMRDLGNT
LIVVEHDDDTMRAADYLVDVGPGAGNHGGEVVSSGTPNKVMKDKKSLTGQYLSGKKRIEV
PEYRREITDRKIQIKGAKSNNLKNVNVDFPLSVLTVVTGVSGSGKSSLVNEILYKALAQK
INKSKVKPGNFDEIKGIDQLDKIIDIDQSPIGRTPRSNPATYTGVFDDIRDVFAQTNEAK
IRGYQKGRFSFNVKGGRCEACKGDGIIKIEMHFLPDVYVPCEVCDGKRYNRETLEVTYKG
KNIADVLEMTVEEATHFFENIPKIKRKLQTLVDVGLGYITLGQQATTLSGGEAQRVKLAS
ELHKRSTGRSIYILDEPTTGLHVDDISRLLKVLNRIVENGDTVVIIEHNLDVIKTADHII
DLGPEGGEGGGTIIATGTPEEIAQNKGSYTGQYLKPVLERDSVE
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggaccgtcaattgtagtaaaaggtgcacgagcacataatttaaaaggagtagat
attgaattacctaaaaacaagttgattgtcatgactggactttcaggctcaggtaaatct
tcgttagcgttcgatactatttatgctgaaggtcaacgacgttatgtggaatcgttaagt
gcatatgcgcgacaatttttaggacaaatggacaaacctgatgtagataccattgaaggt
ttgtcaccagcaatatctattgatcagaagacgacaagtaaaaacccacgttctaccgtt
gccactgtgactgaaatctatgattatattcgattattatatgcgcgtgtcggtaaaccg
tactgtccttatcacggtatagaaattgaatcacaaactgttcaacaaatggttgatcgt
attttagaattggaagaacgtacaaaaattcaattacttgctccagttatatcacataga
aaaggaagtcatgaaaaattaattgaagatataggtaagaaaggatatgtgcgtttacgt
gttgatgatgaaatcgtcgatgtaaatgaagtgcctcaattggataaaaataaaaatcac
acaattgaagttgttgttgatagacttgtagttaaagatggcattgagacgcgtttagcg
gactctattgagacagcacttgaacttgctgaaggtaatttaacagttgacgttattaat
ggagaagaacttaaattctctgagaaccacgcatgtcctatatgtggtttctctattggt
gaattagaacctagaatgtttagtttcaacagtccgtttggtgcgtgtccaacttgtgat
ggtttaggtcaaaaactaaaagtagacctagatttagtcattcctgataaaaataaaact
ttaaatgaaggtgcaattgaaccatgggaaccaacaagttcggatttttatccaacttta
ttaaaacgtgtatgtgaagtctacaaaattaatatggataagccatataaaaaattgact
gatagacaaaaaaatatacttatgaatggttctggagaaaaagaaattgaatttactttc
acgcaacgaaatggtggtactcgtaaacgtaaaatggtttttgaaggtgtggtacctaac
attgaccgtcgttaccatgaatctccctctgaatatacacgcgaaatgatgagtaaatat
atgacagagttaccgtgtgaaacttgtcatggcaaacgcttaagcaaagaagcgttatct
gtatacgtaggcgactataatataggtgaagtcgttgaatattcaattaaaaacgcgctt
tattatttcgaaaatttaaaattaagcgaccaagataaatcgattgcagatcaaatttta
aaagagattatttcaagattatcatttttaaataatgttggtttggaatatttgacttta
gatcgctcatcagggactttatctggaggggaagcacaacgtattcgtttagcaacacaa
attggttcacgattaaccggagtactatatgttttagatgaaccttctattggattacat
caaagagataatgatagattaattaatactttaaaagaaatgcgtgatttaggtaataca
cttattgtcgttgaacatgacgatgatactatgagagcagctgattatttagttgatgtg
ggtccgggagctggtaaccacggtggagaggttgtctcaagtggtacccctaataaagta
atgaaagataaaaaatccttaactggtcaatatttaagtggaaaaaaacgaattgaagtc
cctgaatacagacgagaaatcaccgatagaaagattcaaattaaaggtgctaaaagtaat
aatttgaaaaatgtaaatgtagacttcccactatctgtcttaactgttgttacaggtgtg
tcaggttctggtaaaagttcactcgtcaatgaaattttatataaagcattagctcaaaaa
attaataaatctaaagtgaaacctgggaattttgatgaaattaaaggaattgatcaatta
gataaaatcattgatattgatcaatcgccaataggtagaacaccacgttctaacccagcc
acatacactggtgtctttgatgacataagagatgtctttgcacaaacgaatgaagctaaa
atacgaggttatcaaaaaggtagatttagttttaatgtcaaaggtggacgatgtgaagct
tgtaaaggtgatggaattataaaaattgaaatgcattttttaccagatgtctatgtacct
tgtgaagtatgtgatggtaaacgctataatcgtgagactttagaggtaacatacaaaggt
aaaaatattgcggatgtattagaaatgactgttgaagaagctacgcatttctttgaaaat
attcctaagattaaacgtaaattacaaacacttgtagatgttgggttggggtacattact
ttaggtcaacaagctactacattatctggtggcgaagcgcaacgtgtaaaactcgcatca
gaattgcacaaacgttcaacggggcgttctatttatattcttgatgaaccaactacagga
ttacatgtcgacgatataagtcgtttattaaaggtattgaatcgtatagtggaaaatggt
gatacggtcgttattatcgaacacaatcttgatgttattaaaacggctgatcatattatt
gatttaggtccagaaggcggtgaaggtggaggaacaatcatcgcaactggtacacctgaa
gagattgctcaaaataaagggtcttacactggtcaatacttaaaaccagtattagagaga
gacagcgttgaatag
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