Staphylococcus epidermidis RP62A (MRSE): SERP0831
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Entry
SERP0831 CDS
T00229
Name
(GenBank) DNA polymerase III, alpha subunit, Gram-positive type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
ser
Staphylococcus epidermidis RP62A (MRSE)
Pathway
ser03030
DNA replication
ser03430
Mismatch repair
ser03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ser00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SERP0831
03430 Mismatch repair
SERP0831
03440 Homologous recombination
SERP0831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ser03032
]
SERP0831
03400 DNA repair and recombination proteins [BR:
ser03400
]
SERP0831
Enzymes [BR:
ser01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SERP0831
DNA replication proteins [BR:
ser03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SERP0831
DNA repair and recombination proteins [BR:
ser03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SERP0831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
HHH_3
tRNA_anti-codon
RNase_H_2
T2SSK
YhfH
Motif
Other DBs
NCBI-ProteinID:
AAW54192
UniProt:
Q5HPS7
LinkDB
All DBs
Position
836002..840312
Genome browser
AA seq
1436 aa
AA seq
DB search
MTNREKFKVLADQIKISNQLEQDILEQGELTRIDVSNKNRTWTFQISLPHFLSHEDYLLF
THAIEEEFKEIATVAIDFSIKDTNNQDEFALKYFGHCIDQTRLSPKVKGQLKQKKLIMSG
NVLKVLVSNDIERNHFDKACNGSLVKAFRQCGFEIDKVVFETDSTNHDDDLASLEAHIQQ
EDEQSAREATEKLEKMKAEKAKQQDNNESTVEKCQIGKPIQIENIKPIESIIEEEFKVAI
EGVIFDINLKELKSGRHIVELKVTDYTDSLVLKMFTRKNKDDLDHFKALSVGKWVRAQGR
IEEDTFVRDLVMMMSDIEEIKKTPKQDKAEDKRVEFHLHTSMSQMDGIPNISAYVEQAAK
WGHQALAVTDHNVVQAFPDAHNAAEKHGIKMIYGMEGMLVDDGVPIAYKPTDRNLKDATY
VVFDVETTGLSNQYDKIIELAAVKVHNGEIIDKFERFSNPHERLSETIINLTHITDDMLT
DAPEIEEVLTEFKEWVGDAIFVAHNASFDMGFIDTGYERLGFGPSTNGVIDTLELSRTIN
TEYGKHGLNFLAKKYGVELTQHHRAIYDTEATAYIFIKMVQQMKELGVNNHLEINKKLTN
EDAYKRARPSHVTLIVQNQEGLKNLFKIVSASLVKYYYRTPRIPRSLLNEYREGILIGTA
CDEGELFTAVMQKDQSEVEKIAKFYDFIEVQPPALYQDLMDRELIRDNETLTQIYKRLID
AGKSANIPVIATGNAHYLYEHDAIARKILIASQPGNPLNRSTLPEAHFRTTDEMLDDFHF
LGEEKAYEIVVTNTNELANKIEKVVPIKDKLFTPRMDGANEEIRELSYSNAKKLYGEDLP
QIVIDRLEKELDSIIGNGFSVIYLISQRLVKKSLDDGYLVGSRGSVGSSFVATMTEITEV
NPLPPHYICSHCKTSEFFDDGSVGSGFDLPDKKCPTCGNELIKEGQDIPFETFLGFKGDK
VPDIDLNFSGEYQPNAHNYTKVLFGEDKVFRAGTIGTVAEKTAFGFVKGYLNDQGIHKRG
AEIDRLVKGCTGVKRTTGQHPGGIIVVPDYMDIYDFTPIQFPADDQSAAWMTTHFDFHSI
HDNVLKLDILGHDDPTMIRMLQDLSGIDPKTIPVDDKETMQIFSGPESLGVTEDEILCKT
GTFGVPEFGTGFVRQMLEDTKPTTFSELVQISGLSHGTDVWLGNAQELIRQGICDLSSVI
GCRDDIMVYLMYAGLEPSMAFKTMEFVRKGRGLTDEMVEAMKENNVPDWYLDSCRKIKYM
FPKAHAAAYVLMAVRIAYFKVHHPLYYYAAYFTIRASDFDLITMIKDKTSIRNTVKDMYS
RYMDLGKKEKDVLTVLEIMNEMAHRGFRLQPISLEKSQAFDFIIEGDTLIPPFISVPGLG
ENVAQRIVEAREEGPFLSKEDLNKKAGLSQKVIDYLDELGSLPDLPDKAQLSIFDM
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatcgagaaaagtttaaagtgcttgccgatcaaataaaaatatcaaatcaacta
gaacaagatattcttgaacaaggtgaactcactcgtatagatgtttcaaataaaaacaga
acatggactttccaaatatcactcccacattttttatctcatgaagattatcttcttttt
acacatgcaattgaagaagaatttaaagaaatagctacagtagcaattgatttttcaatt
aaagataccaacaatcaagatgagtttgctttaaaatatttcggacattgtattgatcaa
acacgattgtcgccaaaagtgaaaggtcaattgaaacaaaaaaaactcattatgagtgga
aatgttttaaaagtcttagtttcaaatgacattgagagaaatcattttgataaggcatgt
aatggtagtttggttaaagcatttagacagtgtggctttgaaattgataaagtcgttttt
gaaacagattcaacaaatcacgatgatgaccttgcatcgttagaagcacatattcaacaa
gaagatgaacaaagtgcaagagaagcaactgaaaaattagaaaaaatgaaagcagaaaaa
gcgaaacaacaagataataatgaaagtacagtggaaaaatgtcagattggaaaaccaatt
cagattgaaaatataaaaccaattgaatcaattattgaagaagaattcaaagtagctatt
gaaggtgttatatttgatattaacctaaaagaacttaaaagtggacgtcatatagttgag
cttaaagttactgattacacagattcacttgtattaaaaatgtttacaagaaaaaataaa
gatgacttggaccactttaaggcacttagtgttggtaaatgggttagagctcaaggtcgt
attgaagaagatacttttgttagggatcttgtcatgatgatgtcagatattgaagaaatt
aaaaagacacctaaacaagataaagcagaagataagcgtgtagagtttcatttacatacg
tctatgagtcaaatggatggtattcctaatattagtgcatatgttgaacaagctgctaaa
tgggggcaccaagctttagcagtaacagatcacaacgtagtacaagcttttcctgatgca
cataatgctgccgaaaaacatggtattaagatgatttatggtatggaaggtatgctagta
gacgatggtgttcctatagcttataaaccaacagaccgtaatttaaaagatgcaacatat
gtggtgtttgacgtagagacaacaggtctttctaatcaatatgataaaattattgaatta
gctgcagtaaaagtgcataacggtgaaattatagataagtttgaacgttttagtaatcca
cacgaaagattatctgaaaccattatcaaccttacacatatcactgatgatatgttaact
gatgctcccgaaattgaagaagtgttaactgaatttaaagagtgggttggagatgctata
tttgtagctcataatgcttcatttgatatgggatttattgacacaggatatgaaaggtta
ggctttggaccttctacaaacggtgtaattgatacacttgagctttcacgtacaattaat
accgaatatgggaaacatggtttgaatttccttgccaaaaaatatggtgtcgaattaacg
caacatcatagagcgatttatgatacagaagcaacagcttatatttttataaaaatggtt
caacaaatgaaagaactaggtgtgaacaaccatctagaaattaataaaaaattaactaat
gaagatgcatataaaagagctcgtccatctcacgttacactcattgttcaaaatcaagaa
ggtcttaaaaatttatttaaaatagttagtgcttcattagttaagtattattaccgtacg
ccaagaattccacgttctcttttaaatgaatatcgagaagggatcttgattggtacagct
tgtgatgagggtgaattattcacagcagtaatgcagaaggatcagtcggaagtagaaaaa
atagcaaagttctatgattttatagaagttcaaccgcctgcgctttatcaagatttaatg
gatagagaattaatacgagataatgaaacgttaacacaaatttacaagcgattaatagat
gctggtaaaagcgctaatatcccagtgattgctactggtaacgcgcattatctatatgaa
catgatgctatagccagaaaaattttaattgcatcccaaccagggaatccattaaatcgt
tcaacattaccagaagctcactttagaaccactgatgaaatgttagatgattttcacttc
ttaggtgaagaaaaagcatatgaaatcgttgtaacaaatacaaatgagctcgctaataaa
attgaaaaagtggttcctataaaagataaactatttacgccaagaatggatggggctaat
gaagaaattcgtgagttgagttattctaatgcgaaaaaactatatggtgaagatttacca
caaattgttatagatcgccttgaaaaggaattagatagtattattggtaatggcttttct
gttatttacctcatatctcaacgtttggtgaagaaatcgctagatgatggttatttagtt
ggatcgcgtggttcagttggttctagtttcgtagcaacaatgactgaaattacagaagtt
aatccgcttccaccacactacatttgttcacattgtaagacaagtgagttctttgatgat
ggttcggttggatctggattcgatttaccagataaaaaatgtcctacttgtggtaatgaa
ttaattaaagaaggacaagatatcccttttgagacattccttggatttaaaggagataaa
gttccagatattgatttgaactttagtggtgaatatcaacctaacgctcataattacaca
aaagtattgtttggtgaagataaagtatttcgtgctggaacaataggtactgttgctgaa
aaaacagcttttggtttcgtaaaaggttacttaaatgatcaaggtattcacaaacgtggt
gctgaaattgatcggttggttaaaggttgtacaggggtcaaacgtacaactggtcaacat
cctggaggaatcattgttgtaccggattacatggatatttatgattttacaccgattcaa
ttcccagcagacgaccaaagtgcagcgtggatgacaacccatttcgacttccattcaata
cacgataatgtcttaaaattagatatattaggacatgatgacccaacgatgattcgtatg
ttacaagacttatcaggaattgaccccaaaactataccagtagatgataaagaaacaatg
caaatatttagtggtcctgagagtttaggtgttacagaagacgaaatattatgtaagaca
ggtacatttggtgtaccagaatttggtactggatttgtacgtcaaatgcttgaagatact
aagccaacgacattctcagaattagttcaaatttcaggtttatctcatggtacggacgtt
tggttaggtaatgcacaagagttaattcgtcaagggatatgtgacttatctagtgtgata
ggctgtcgtgatgatatcatggtatatctgatgtatgctggacttgaaccgtcaatggct
tttaaaacgatggaatttgtacgtaaaggtcgtggcttaacagatgaaatggttgaagcg
atgaaggaaaataacgtgccagattggtatttagattcttgtcgtaaaattaaatatatg
ttccctaaagctcatgccgctgcttatgtactgatggctgtaagaattgcatactttaaa
gtacatcatccactatattattatgcagcatactttaccataagagcttccgattttgac
cttataacaatgattaaagataaaacgagtattcgtaatacagttaaagatatgtattca
cgatatatggatttagggaaaaaagagaaagatgtattaactgtattagaaataatgaat
gaaatggcgcatcgaggttttcgattgcaaccgattagtttagaaaaaagccaagctttt
gacttcatcattgaaggggatacattgattcctccattcatttcagtgccaggacttgga
gaaaacgttgcacaaagaattgttgaagcgagagaagagggaccatttttatccaaagaa
gatttaaataaaaaagccggcttatctcaaaaggttattgactatttagatgaattaggc
tcattgccagatttacctgacaaggcacaattgtcgatatttgatatgtaa
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integrated database retrieval system
