Staphylococcus epidermidis RP62A (MRSE): SERP0838
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Entry
SERP0838 CDS
T00229
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ser
Staphylococcus epidermidis RP62A (MRSE)
Brite
KEGG Orthology (KO) [BR:
ser00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ser03016
]
SERP0838 (truB)
Enzymes [BR:
ser01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SERP0838 (truB)
Transfer RNA biogenesis [BR:
ser03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SERP0838 (truB)
Prokaryotic type
SERP0838 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF3718
Spectrin_SESTD1
Motif
Other DBs
NCBI-ProteinID:
AAW54207
UniProt:
Q5HPS0
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All DBs
Position
845779..846696
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AA seq
305 aa
AA seq
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MYNGILPVFKERGLTSHDVVFKLRKILKMKKIGHTGTLDPEVNGVLPICLGDATKVSDYI
MEMGKTYHAMITLGKSTTTEDQTGDILETRAVDKNDINEDTIDQVLQQFEGHIQQIPPMY
SSVKVNGRKLYEYARNNETVERPKRQVFIKDIHRISEVTFQEQTCHFEVEVTCGKGTYIR
TLATDIGLKLGFPAHMSRLTRIASGGFQLESSLTIDQIKELHEHDSLHNELFPIEYGLKG
LKSFQVKDSNFKKKICNGQKFHKKVLSQNVKEPFIFVDSSTQKVLAIYIVHPDKPYEIKP
KKVFN
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtataatggcatactaccggtatttaaggaacgaggtttaacaagtcacgacgtcgtt
tttaaattacgtaaaattttaaaaatgaaaaaaattggtcatacaggaacattagatcct
gaagttaatggtgtgttaccaatttgtttaggcgatgcgacaaaagtcagtgattatatc
atggaaatgggaaaaacttatcacgctatgataacgctaggaaagagtacgactactgaa
gaccaaactggagatattttagaaactagggctgttgataagaatgatattaatgaagat
acgattgaccaagtgttgcagcaatttgaggggcatattcaacaaattccgcctatgtat
tcttctgttaaagtaaatggaagaaaattatatgaatatgcgagaaataatgaaactgtc
gaacgccctaaacgacaagtttttattaaagatatacatagaatatctgaagttactttc
caggagcagacatgtcattttgaagttgaagtaacatgtggtaaaggaacttatattaga
actttagctacagatattggacttaaacttggttttccagctcatatgtcacgtctaact
agaattgcttctggcggttttcaattagaaagtagtttaacgattgatcaaattaaagaa
ttacatgagcatgattcattacataatgaattgtttcctatagaatatggcttaaaaggt
ctgaaatcattccaagtgaaagattcaaattttaaaaagaaaatctgtaacggtcaaaaa
tttcataaaaaagtgttaagtcaaaatgttaaagaaccttttatatttgtcgatagtagc
actcaaaaagttttagcaatatatatagttcatccagataaaccttatgaaataaaacct
aaaaaagtttttaattaa
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