Staphylococcus epidermidis RP62A (MRSE): SERP0918
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Entry
SERP0918 CDS
T00229
Symbol
sbcC
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ser
Staphylococcus epidermidis RP62A (MRSE)
Brite
KEGG Orthology (KO) [BR:
ser00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ser03400
]
SERP0918 (sbcC)
DNA repair and recombination proteins [BR:
ser03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SERP0918 (sbcC)
Archaeal homologous recombinant proteins
SERP0918 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
YjcZ
ABC_tran
PriA_3primeBD
Motif
Other DBs
NCBI-ProteinID:
AAW54293
UniProt:
Q5HPJ3
LinkDB
All DBs
Position
926581..929610
Genome browser
AA seq
1009 aa
AA seq
DB search
MKPLHIVMENFGPFIKETIDFEQVETDQLFLISGKTGSGKTMIFDAIVYALYGMASTKTR
KEGDLRSHFADGKSPMSVIYQFKVNNQTFKIHREAPFIKEGNITKTQAKLNIYELVDNQF
ELRESKVNQGNQFIVQLLGVNAEQFRQLFILPQGEFKKFLQSNSKDKQSILRTLFNSERF
DEIRHLLVENVKQEKVQIENRYTQIENLWNDIDTFNNDELALYKELESSQTDKMIEKFPQ
FNDYGCKILKSFEEAKNKITKELDDLNHKYKVNVELSENTKKLKAEKIKFDDLKKEQNYI
DKLKQELKMIQESKVLITYFTRLQSLKKDKDELVSLHEQSKLNETNYHNEIKGFQKQLEH
LSTRENEITQFNQYLEKNQVFFNQLDKIISSYQQKPVIEEEIKRLYSEYNDLITKKEELT
KEMNNKNKDFAIIEHYTEEIYKLKKIIDESERQKKDEKLFDKLQLDKSSYLSKLKEKKEQ
LNEIESSITNIDATLIDLNDKKDFVNEIKSAMSIGDTCPICGNEIHSLGEHIDFESIAQK
NNKIKRLESKKVKIRDEIIKIETRIEELNHRENELNFEKQEKKDISELQKQLNHLNQLKD
EQQSINKLVENFEKQEKEIVNKIHQFDLDLSRKNTQKEKLEIQINDFERHSQFSSVNDFE
TYYSHAKKQVETYEYENEKTKDKLNELNNKLKIEMNDQKHLTENLTQTSKEINNLELKME
KEMQQLGFESYDQVKSAADLSAQKDEIEREINIYNKNYQSYEIEINRLKELVKGKKLLNL
EELRQSIEKTNLKLDETNSQIATISYKIDNNSNKFNKIKNIIQILDDELKVQKEIFLLSE
ILAGKNDYKLTLENYVLIYYLEKIIFQANQRLSFMSGNRYQLIRREAISLGLSGLEIDVF
DFHSNKSRHISSLSGGETFQASLALALGLSEVVQQESGGITLDSMFIDEGFGTLDQETLE
TAIDTLINLKSSGRMVGIISHVSELKQRIPLILEVTSNQYESHTQFRKN
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
ttgaagcctttacatatagttatggagaactttggcccttttattaaagaaactattgat
tttgagcaagttgaaactgatcaactctttttaattagtggtaaaactggatctggtaaa
acaatgatttttgatgctatagtatacgcattatacggtatggcttcgaccaaaactaga
aaagaaggagatttaagaagtcattttgcagacggtaaatcgccaatgtctgtaatttat
caatttaaagttaataatcaaacttttaaaattcatagagaagcgccatttattaaagag
gggaatataactaaaacacaagccaagttaaatatatatgaattagttgataatcaattt
gaattaagagaaagtaaagtgaatcaaggtaatcaatttatcgtacaattattaggcgtt
aatgctgaacaatttcgtcaattatttattttgcctcaaggagaatttaaaaagtttctt
cagtcaaatagtaaagacaaacaatcgattcttagaacactttttaatagtgagcgattt
gatgagattagacatctacttgtagaaaatgtaaagcaagaaaaagtacaaattgaaaat
agatacactcaaattgaaaatttatggaatgatatagatacatttaataatgatgaattg
gccttatataaagaattagagagttctcagacagataaaatgattgaaaaattcccacaa
tttaatgattatggatgcaaaattctcaagtcatttgaagaagctaagaataaaataact
aaggaattagatgatttaaatcataaatataaagtgaatgttgaattaagtgagaatact
aaaaaattaaaagcggaaaaaatcaaatttgacgatttgaaaaaagaacaaaattatatt
gataaattaaagcaagaattaaaaatgattcaggaatctaaagtattaatcacttatttt
actaggttacaaagtttaaaaaaagataaagatgaattagtgtcacttcatgagcaatca
aaattaaacgaaacaaactatcacaatgaaattaaaggttttcaaaaacaactcgaacat
ttatcaacacgagaaaatgaaataactcaatttaatcagtatctagaaaaaaaccaagtt
ttcttcaatcaattagataagattattagtagttatcaacaaaaaccggtaattgaagaa
gaaataaaaagattatacagtgaatataatgatttaataaccaaaaaagaagaattgacg
aaagaaatgaacaacaagaacaaagattttgcaattattgaacattacactgaagagatt
tataagctgaaaaagattatagatgaatctgaaagacaaaaaaaggatgagaaattattt
gataaattacaactagataaatcatcttatcttagcaaattaaaagagaagaaagaacag
ttaaatgaaattgaatcatcaatcaccaatatagatgcgactttaattgatttgaatgac
aaaaaggattttgtaaatgaaataaagtccgctatgtcaattggagatacctgtccaatt
tgtggtaatgaaatacattcattgggagaacatattgattttgaatcaattgctcaaaaa
aataataaaataaaacggttagaaagtaagaaggtaaaaattcgtgatgaaataatcaaa
atagaaactcgaattgaagaattaaatcatagagaaaatgaattaaattttgagaaacaa
gaaaagaaggatattagtgagcttcaaaaacagcttaatcatttgaatcaactaaaagac
gagcaacaaagcataaataagttagtagaaaattttgagaaacaagaaaaagaaatagtt
aataaaatacatcagtttgatttagatttgagtcgaaagaacacgcaaaaagaaaaactg
gaaattcaaattaatgattttgaacgacattcacaattttcatcagtaaatgattttgaa
acttattattctcatgctaaaaaacaagttgagacgtatgagtatgagaatgagaaaact
aaagataaattgaacgagttgaataataagttaaagatagaaatgaatgatcaaaaacat
ttaactgagaatttaactcaaacaagtaaggaaataaataatttagaattaaaaatggaa
aaagaaatgcaacaacttggttttgagtcttatgatcaagtcaaaagcgctgcagattta
agtgctcaaaaagatgaaatagaaagagaaattaatatttataataagaactatcaaagt
tatgaaatagagattaacagactcaaagaattggttaagggcaaaaaattattaaattta
gaagaattacgacaatctatagaaaaaacaaacttgaaactagatgaaacgaattcacaa
atagctacgattagctataaaatagataataactctaacaaatttaataaaataaaaaat
ataattcagattctcgatgatgaattaaaagtgcaaaaagaaattttcttgctatcagaa
atattagctggtaaaaatgattataaattaacactagaaaattatgttttaatttattac
ttggaaaaaataatttttcaagcgaatcaacgactttcatttatgagtggaaatagatat
caactgattagaagagaggccatttccttagggttaagtggattggaaattgacgtgttt
gattttcattcaaataaatcgagacacataagttcactttcaggaggagaaacatttcaa
gcatcactagctttagctttaggattaagtgaagttgtacaacaagaatcaggtggaatc
actttagattctatgtttatagatgaaggatttggcactttagatcaagaaacactcgaa
actgcgatagatacattaattaatttaaaatcatctgggcgcatggttggtataatctca
catgtaagcgaacttaagcaacgcatacctttgattttagaagtgacaagtaaccaatac
gaaagtcatacacaatttagaaaaaattaa
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