Staphylococcus epidermidis RP62A (MRSE): SERP1254
Help
Entry
SERP1254 CDS
T00229
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ser
Staphylococcus epidermidis RP62A (MRSE)
Pathway
ser03030
DNA replication
ser03410
Base excision repair
ser03420
Nucleotide excision repair
ser03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ser00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SERP1254 (polA)
03410 Base excision repair
SERP1254 (polA)
03420 Nucleotide excision repair
SERP1254 (polA)
03440 Homologous recombination
SERP1254 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ser03032
]
SERP1254 (polA)
03400 DNA repair and recombination proteins [BR:
ser03400
]
SERP1254 (polA)
Enzymes [BR:
ser01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SERP1254 (polA)
DNA replication proteins [BR:
ser03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SERP1254 (polA)
DNA repair and recombination proteins [BR:
ser03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SERP1254 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SERP1254 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
DNA_pol_A_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AAW54618
UniProt:
Q5HNL4
LinkDB
All DBs
Position
complement(1290547..1293177)
Genome browser
AA seq
876 aa
AA seq
DB search
MNKLVLIDGNSLSFRAFYALPLLSNHAGIHTNAVYGFAMLLEKIIKEEKPNHFLVAFDAG
KTTFRHSKYSEYKGGRQKTPPELSEQFPYIRQLLDAYHIKRYELDNYEADDIIGTLSRQA
DEEDFETIIITGDRDLTQLATDNVTIYYTKKGVTDVDHYTPKFIAEKYNGLVPKQIIDMK
GLMGDTSDNIPGVAGVGEKTAIKLLNQFESVEGVYEHIEEVTAKKLKEKLINSKDDALMS
KDLATINVHSPIEVSLEDTKLTLQDDTTEKIELFKKLEFKQLLADIDTSSTNEEVIDKTF
EIEQDFQNVDLNDLNEAVIHFELEGTNYLKDTILKFGFYTNHQHVVINAEDVKDYKHLVQ
WLEDKNTTKIVYDAKKTYVSAHRLGINIENIEFDVMLASYIIDPSRSIDDVKSVVSLYGQ
NYVKDNITIFGKGKKHHIPEEPILNEHIASVTEAIAAVTPTMKSQLEDYNQIELLKDLEL
PLARILSEMEEIGIYTDINDLKEMEFEIQKKLDVLISNIHESAGEAFNINSPKQLGVVLF
ETLQLPVIKKTKTGYSTAVDVLEKLQGEHPIIDDILEYRQLAKLQSTYVEGLQKVISKDH
RIHTRFNQTLAQTGRLSSIDPNLQNIPIRLEEGRKIRKAFKPTSKDSVILSADYSQIELR
VLAHITQDESLKHAFINGHDIHTATAMKVFNVESDQVDSLMRRQAKAVNFGIVYGISDYG
LSQSLGITRKQAKAFIDDYLASFPGVKQYMSDIVKDAKAQGYVETLLHRRRYIPDITSRN
VNLRSFAERTAMNTPIQGSAADIIKLAMVKFSEKIKETKYHAKLLLQVHDELIFEIPKSE
VEDFSKFVEEIMEQALVLDVPLKVDSNYGATWYDAK
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
ttgaataaattagtattaatagatggtaatagtctaagctttagagcgttttatgctctc
cctttactttcaaaccatgcaggtattcatacaaatgcagtttacggctttgctatgctc
ttagaaaaaataattaaagaagaaaaaccgaatcattttttagttgcatttgatgcaggt
aaaacgactttcagacattctaagtacagtgaatataaaggtggtcgtcaaaagactcca
cctgaattaagtgagcaatttccatatattcgtcaacttttagatgcgtatcatattaaa
agatatgaacttgataattatgaagctgatgacattataggaacattaagtagacaagct
gatgaagaagattttgaaaccattatcattacaggtgatagagacttaactcaattagcc
actgataatgttacaatatattatacaaaaaaaggtgttaccgacgttgatcattataca
cctaaatttatagcagagaaatataatggtttagtgccgaaacaaattatcgatatgaaa
ggtctaatgggggatacctctgacaatattcctggcgttgctggtgtcggcgaaaagacg
gctattaaattacttaatcaatttgagtcagtagaaggggtctatgaacatattgaggag
gtcactgcaaaaaaattaaaagaaaaactcatcaatagtaaagatgatgccttaatgagt
aaagatttagcaacaatcaatgttcacagtccgattgaagtatcattagaagatacaaaa
ttaactctacaagacgacactacagaaaaaattgaactatttaaaaagctagaatttaaa
caactattagcagatatagacacatcctctacgaatgaagaagtcatagataaaactttt
gaaattgagcaagactttcaaaatgtagatttgaatgatttaaacgaagcggtaatacat
tttgaactcgaaggcactaattatcttaaagacactattctcaagtttggtttttataca
aatcatcaacatgtagtgataaatgctgaggatgtaaaggattataaacatttagttcaa
tggcttgaagataaaaatacaactaaaattgtctatgatgcaaaaaaaacttatgtatct
gctcatcgattagggattaatatagaaaatattgaatttgatgttatgttagcaagctat
attattgacccatcacgttctattgatgacgttaaatctgtggtaagtttatatggacaa
aattatgtaaaagataatattacaatatttgggaaaggtaagaaacatcatatacctgaa
gaaccaattctaaacgaacacattgcctctgtgacagaagctatagcagctgtaactcca
accatgaaatcacagttagaagattataatcaaattgaactgttgaaagatttagaatta
ccattagcaagaattttaagtgaaatggaagaaattggtatatataccgatatcaatgat
ttgaaagaaatggaattcgaaattcaaaaaaaattggatgtattaatatccaatattcat
gagtcggctggtgaagcgtttaatatcaattctcctaagcaattaggtgttgttttattt
gaaacattacaattgcctgtcattaagaagaccaaaacgggctattcaacagctgtagac
gtattagaaaaactacaaggtgagcatcctattatagatgatattttagaatatagacaa
cttgctaagttgcaatctacgtatgtagagggattacaaaaagtaataagcaaagatcat
agaattcacacacgttttaatcaaacgcttgctcaaactggtagattatcaagtatagat
cctaatttacaaaatatacctatacgattagaagaaggaagaaagattagaaaggccttt
aaaccaacttctaaagatagtgtgattttatctgctgattattcacaaattgagttacgt
gtacttgctcatattacgcaagatgaaagtttaaaacatgcatttataaacggacatgat
attcacactgcaacagcaatgaaagtatttaatgttgaatctgaccaggttgatagttta
atgagacgtcaagcaaaagctgttaactttggtattgtatatggtatcagcgattatgga
ttgagtcagagcttgggtattactagaaaacaagcaaaagcatttattgatgattattta
gctagttttccaggtgtaaaacaatatatgtcagacattgttaaagatgcaaaagcacaa
ggttatgtggaaacactacttcatcgtcgtcgatacattcctgatataacaagtagaaac
gttaatttaagaagttttgcagaaagaacagcaatgaatacacccatacaaggtagtgca
gctgacataataaaattagcaatggttaaattcagtgaaaagattaaagaaactaaatat
catgctaagttattattacaagttcatgatgaactcatatttgaaataccaaaatcagaa
gtagaagattttagtaaatttgtagaagaaattatggaacaagcattagtgctcgatgta
cctttaaaagtagattcgaattatggtgcaacatggtacgatgctaaataa
DBGET
integrated database retrieval system
