Staphylococcus epidermidis RP62A (MRSE): SERP1621
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Entry
SERP1621 CDS
T00229
Name
(GenBank) DNA-binding protein HU, putative
KO
K03530
DNA-binding protein HU-beta
Organism
ser
Staphylococcus epidermidis RP62A (MRSE)
Brite
KEGG Orthology (KO) [BR:
ser00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ser03032
]
SERP1621
03036 Chromosome and associated proteins [BR:
ser03036
]
SERP1621
03400 DNA repair and recombination proteins [BR:
ser03400
]
SERP1621
DNA replication proteins [BR:
ser03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SERP1621
Chromosome and associated proteins [BR:
ser03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SERP1621
DNA repair and recombination proteins [BR:
ser03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SERP1621
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
DUF4681
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
AAW54996
UniProt:
Q5HMK7
LinkDB
All DBs
Position
1646288..1646617
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AA seq
109 aa
AA seq
DB search
MTKLAKKDLINELQESARVRGLEITKKDAATLFSAFEDTVIEAIHAADEVGYDSFSTNFG
TFKIVEVSEKSGVSRLGGEEKFWTSPAHKTVRFKLNKSVKDKLKAETSK
NT seq
330 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaattagctaaaaaagatttaattaacgaattacaagaaagtgctcgtgtacgt
ggtttagaaatcactaaaaaagacgctgcaacattattctcagcatttgaagacacagta
attgaagcaattcacgctgctgatgaagttggttacgatagcttctcaacaaactttggt
acattcaaaattgttgaagtttcagaaaaatctggtgtatcacgcttaggtggagaagaa
aaattttggacatcaccagcacacaaaacagttcgttttaaattaaataaatcagttaaa
gataaattaaaagcagaaacttctaagtaa
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