Staphylococcus epidermidis RP62A (MRSE): SERP2548
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Entry
SERP2548 CDS
T00229
Symbol
gyrA
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ser
Staphylococcus epidermidis RP62A (MRSE)
Brite
KEGG Orthology (KO) [BR:
ser00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ser03032
]
SERP2548 (gyrA)
03400 DNA repair and recombination proteins [BR:
ser03400
]
SERP2548 (gyrA)
Enzymes [BR:
ser01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SERP2548 (gyrA)
DNA replication proteins [BR:
ser03032
]
Prokaryotic type
DNA Topoisomerases
SERP2548 (gyrA)
DNA repair and recombination proteins [BR:
ser03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SERP2548 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Retrotran_gag_2
Motif
Other DBs
NCBI-ProteinID:
AAW53372
UniProt:
Q5HK04
LinkDB
All DBs
Position
complement(2607094..2609775)
Genome browser
AA seq
893 aa
AA seq
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MAELPQSRINERNITSEMRESFLDYAMSVIVSRALPDVRDGLKPVHRRILYGLNEQGMTP
DKPYKKSARIVGDVMGKYHPHGDSSIYEAMVRMAQDFSYRYPLVDGQGNFGSMDGDGAAA
MRYTEARMTKITLELLRDINKDTIDFIDNYDGNEREPSVLPARFPNLLVNGAAGIAVGMA
TNIPPHNLTEVIDGVLSLSKNPDITINELMEDIQGPDFPTAGLVLGKSGIRRAYETGRGS
IQMRSRAEIEERGGGRQRIVVTEIPFQVNKARMIEKIAELVRDKKIDGITDLRDETSLRT
GVRVVIDVRKDANASVILNNLYKQTPLQTSFGVNMIALVNSRPKLINLKEALIHYLEHQK
TVVRRRTEYNLKKARDRAHILEGLRIALDHIDEIITTIRESDTDKIAMASLQERFKLTER
QAQAILDMRLRRLTGLERDKIESEYNELLEYIKELEEILADEEVLLQLVRDELTEIKERF
GDERRTEIQLGGLEDLEDEDLIPEEQIVITLSHNNYIKRLPVSTYRSQNRGGRGIQGMNT
LDEDFVSQLVTMSTHDHVLFFTNKGRVYKLKGYEVPELSRQSKGIPIINAIELENDETIS
TMIAVKDLESEEDYLVFATKQGIVKRSSLSNFSRINKNGKIAINFKEDDELIAVRLTTGN
EDILIGTAHASLIRFSESTLRPLGRTAAGVKGISLREGDTVVGLDVADSESEDEVLVVTE
NGYGKRTPVSEYRLSNRGGKGIKTATITERNGNIVCITTVTGEEDLMVVTNAGVIIRLDV
HDISQNGRAAQGVRLMKLGDGQFVSTVAKVNEEDDNEENADEAQQSTTTETADVEEVVDD
QTPGNAIHTEGDAEMESVESPENDDRIDIRQDFMDRVNEDIESASDNEEDSDE
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattacctcaatcaagaattaatgaacgaaatataaccagtgaaatgcgtgaa
tcattcttagactatgctatgagtgttatcgtttctcgtgcattacctgatgttagagac
ggattaaagccagtacatcgtcgtattctttatggtttaaatgaacaaggtatgacgccc
gataaaccttataagaaatctgcacgtatagtcggggatgtcatgggtaaatatcaccct
catggtgattcttcaatttatgaagcaatggtaagaatggcccaagactttagttatcgt
tatccacttgtagatggtcaaggtaactttggctctatggatggtgacggggcagccgca
atgcgttataccgaagcacgtatgactaaaataacattagaacttttacgtgatatcaac
aaagacacaattgattttattgacaactatgatggtaatgaaagagagccgtcagtctta
cctgcacgtttccctaacttactagtaaatggtgcggcaggaattgccgtaggtatggct
acaaatattcctccccacaatttaactgaagttattgatggtgtgctcagtttaagtaag
aatccagacatcacaattaatgagctgatggaagacatccaaggtcctgattttcctaca
gccggtttagtactagggaaaagtggtattcgtcgagcttatgaaacaggtcgtgggtca
attcaaatgcgttctcgtgctgaaatagaagaacgtggtggtggccgtcaacgtattgtc
gtaacggaaatacctttccaagtcaataaagcgcgtatgattgaaaaaatcgcagagtta
gttagagataagaaaatcgacggtattacagatttacgtgatgaaacaagtttgcgtaca
ggtgtaagagtagttattgatgtacgtaaagatgcaaatgcgagtgttattttaaataat
ttatataaacaaactccattacaaacatcatttggtgtgaatatgattgctttagtgaat
agtagacctaaactaatcaatttaaaagaagcacttatccattacttagaacaccaaaaa
acagtggttagacgacgtactgaatataatcttaaaaaagcaagagaccgtgcccatatt
ctagaaggtttacgaatagcactagatcatattgatgaaattatcacaacaattcgtgaa
tcggacactgataaaattgcgatggcaagtttacaagagcgttttaaactaactgaacgt
caagctcaagcaattttagatatgcgtttaagacgtttaactggattagaaagagataaa
atagaatctgagtataatgaacttctagaatatattaaagagttagaagagattttagct
gatgaagaagtactattacaattagttcgtgatgaattgactgaaattaaagaacgtttc
ggcgatgaacgtcgcactgaaattcaattaggtggtctagaagatcttgaagatgaagac
ttaatccctgaagaacaaattgttattacattaagtcataataactatattaaacgttta
ccagtatctacatatcgttctcaaaatcgtggtggtcgtggcatacaaggtatgaacacg
ttggatgaggacttcgttagtcaattggtaacaatgagtacacatgatcatgttctgttc
tttacgaataaaggtcgtgtatataaactcaaaggttatgaagttcctgagttgtcacgt
caatccaaaggcatacctattattaatgcgattgaactcgaaaatgacgaaacaataagt
acgatgattgcagttaaagaccttgaaagtgaagaagattatctcgtattcgcgacaaaa
caaggtatcgttaaacgttcatcattaagtaacttctcccgtattaacaaaaacggtaaa
attgcaattaactttaaagaagatgatgaattaattgcagtacgtctaacaacaggtaat
gaagatattcttattggaactgcacatgcatcattaattagattttctgaatctacatta
cgcccattaggccgtacagcagcaggtgtgaaaggtatttctctacgtgaaggggatact
gtcgttggtcttgatgttgcagattcagaaagtgaagatgaagtattagtagttactgaa
aatggttacggtaaacgtacacctgttagcgaatatcgtttatcaaatcgtggtggtaaa
ggaatcaaaactgcgacaattaccgagcgtaatggtaacatcgtttgtatcacaactgta
accggtgaagaggatttaatggttgtaactaacgctggtgttattattcgtcttgacgtt
catgatatttctcaaaatggacgtgcagcacaaggtgtacgccttatgaaactcggagat
ggtcaatttgtttctactgttgctaaagtaaacgaagaagacgataatgaggaaaatgca
gatgaagcgcaacaatctactactactgaaacagcagatgtagaagaggtagtggatgat
cagacaccaggcaatgcgattcatacagaaggtgatgcagaaatggaatctgtagaatct
cctgaaaatgatgatcgtattgatatcagacaagattttatggatagagtgaatgaagat
atcgagagtgcttcagataatgaagaagatagtgatgaataa
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