KEGG   Prodigiosinella confusarubida ATCC 39006: Ser39006_000125
Entry
Ser39006_000125   CDS       T05290                                 
Name
(GenBank) type I restriction endonuclease subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
sera  Prodigiosinella confusarubida ATCC 39006
Brite
KEGG Orthology (KO) [BR:sera00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sera02048]
    Ser39006_000125
Enzymes [BR:sera01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Ser39006_000125
Prokaryotic defense system [BR:sera02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Ser39006_000125
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N T1R_D3-like ResIII DEAD EntA_Immun
Other DBs
NCBI-ProteinID: AUH02680
UniProt: A0A2I5TDQ0
LinkDB
Position
26058..29192
AA seq 1044 aa
MLSEDDLEQMSLGWFAGQGWEILHGPDIAPDSDNPLRISFHDVFLRPVLREQLAKLNPHL
PASVLDEVLARITRAESPDIVVSNKAFHHLLLAGVPVEYKRDDKVIHDTALLMDFNHPGN
NHFTVVNQVAISGTKQLRRPDVICYINGLPVAVIELKSPIDANADIWTAFNQLQTYKNEI
SDLFICNEALVISDGYNARIGSLTADEERYLPWKTISNEDDKPLLEWQLETVVKGFFNRE
LLLDYIRYFILFENDGKHLIKKIAAYHQFHAVREAVSATIVASTGKFLPLRCDIKPGSKK
AGVVWHTQGSGKSISMCCYAGKLLQQEEMNNPTIVVVTDRNDLDGQLYATFCQAKDLLKQ
EPQQASDRDQLREMLAARESGGIIFTTVQKFAPLDGEKVHPALSVRDNIVVISDEAHRSQ
YGLSATLDRETGVYKYGYAKHMRDALPNASFMGFTGTPVSSEDKDTRAVFGDYVSIYDIQ
DAVEDGATVQIFYESRLAKLDLNHAELEELSNQVDELVEDEETDQKEKTKGDWSRLEKLV
GSEPRIHQVAADLVKHFEARNATMDGKAMVVAMSRDICVRLYNALVALRPEWHSEDVEKG
SLKVIMTGSASDKEHLQSHIYNKQTKKRLETRFKDLDDPLKIVIVRDMWLTGFDAPCCHT
MYIDKPMRGHNLMQAIARVNRVFKDKPSGLVVDYIGIANELKDALKTYTDSKGKGQTTVD
TKEAFSVLLEKLDIIHGMFAKTATDPGFDYSAFEHNPQRVLLDAANYILGLDDGKKRYFD
VVLALNKSWSLCSTLDEAKPLQKELAFLSAVKVAIIKLTTTDKKFSQSEKNSLLSRILDN
AIIATGVDDVFALAGLDKPNIGLLSDEFLQEVHDMPQRNLAVELLQKLLNDGIHARANNN
VVQEKKYSDRLRTVLLKYNNRAIETAQVIEELIQMAKEFQAAMARDDALGLNPDEIAFYD
ALAENESAVRELGDDILKKLAIEVTLKLRQSTTVDWQVRESVRARLRILVRQTLRKYKYP
PDKTAGAVELILKQAEVVSNSWTV
NT seq 3135 nt   +upstreamnt  +downstreamnt
atgctgagcgaagacgatttggagcaaatgagtctcgggtggtttgccggacaaggatgg
gaaatactgcatgggcctgatatcgcgccggatagcgacaatccgctgcgtatttcattc
cacgatgtatttctgcgcccggtgttacgggagcaactggcgaaactgaatccacacctt
cccgccagtgtgttagacgaagtactcgcccgcatcacccgtgctgaaagcccggatatc
gtcgtcagcaataaagcgttccatcatctgcttctcgctggtgttccggtcgaatataaa
cgtgacgataaagtcatccacgataccgccctgctgatggattttaatcatccgggaaat
aaccatttcacggtagttaatcaggtggccatcagcggaactaaacaactgcgtcgccct
gatgtaatttgttatatcaacggattgccggtcgcggttattgagctgaaaagcccaatt
gatgctaacgccgatatctggaccgcattcaatcagcttcagacttataaaaacgaaatc
agcgacttgtttatctgtaatgaagcactggtgatcagtgatggctataacgcacggatt
ggttctctgaccgccgatgaagaacgttatctgccgtggaaaaccatcagcaatgaagac
gataaaccgctgttggaatggcaattagaaaccgttgttaaaggcttctttaaccgcgag
ttgctgctcgattacatccgttatttcattctgtttgagaatgatggtaaacacctgatc
aagaaaatcgcggcttatcatcagtttcatgccgtgcgtgaggcagtgagtgcaaccatc
gtcgcttccaccggtaaatttttgccgctgcgctgtgatatcaaacccggcagtaaaaaa
gccggtgttgtctggcatacacaaggttcgggtaagagcatttccatgtgctgctatgcc
gggaaattattgcagcaggaagagatgaacaacccgaccatcgtggtggttactgatcgc
aacgatctggatggtcaactttacgccactttctgtcaggccaaagatcttctgaagcaa
gagcctcagcaagccagtgatcgtgaccagttacgcgaaatgctggctgcccgtgaatct
ggcggcatcatctttacgacggtgcagaagtttgctccgctggatggggaaaaagtacat
ccggcactgagcgtacgtgacaacatcgtggtgatttccgatgaagcacaccgcagccag
tatggattgagtgccacactggacagagaaacgggtgtctataaatacggctacgccaag
cacatgcgcgatgcattacccaatgcctcgtttatgggctttaccggcacgccggtctct
tctgaagataaagatacccgcgccgtatttggtgattacgtttcaatttacgacattcag
gacgcagtagaagacggcgcaacagtacagattttctatgaatctcgtctggcaaaactc
gaccttaatcatgcagaactggaagaactttcaaaccaggtcgatgagctggttgaagat
gaagaaaccgaccagaaagaaaaaaccaaaggtgactggagccgtctggagaagctggtg
ggttcagagccccgcattcatcaggtcgctgctgatctggttaaacattttgaagcccgt
aacgctacgatggatggcaaagcaatggttgttgccatgagccgtgacatctgcgtgcgg
ctttataatgcgctggtagcactgcggccggaatggcacagcgaagatgtcgaaaaaggc
agcctcaaagttatcatgaccggttcagcctccgataaagaacacctacagtcgcacatc
tacaataagcagactaaaaaacgtctcgaaacgagatttaaggacctggacgatccatta
aaaatcgtgattgtgcgcgatatgtggctgacggggtttgatgcgccttgttgccacacc
atgtatatcgacaagcccatgcgcgggcataacctgatgcaggccatagcacgcgtgaat
cgggtgttcaaagataaacctagcggtctggtggttgattacatcggcatcgctaatgaa
ctgaaggatgctctgaagacctacacagactcgaaaggtaaaggccaaacgactgttgat
actaaagaagccttttctgtactgttggaaaaactcgatattattcatggcatgtttgcc
aaaactgcaacagatccaggcttcgattattcagcgtttgaacataatccacagagggtc
cttctcgatgcagcaaactacattctcggacttgatgacggtaaaaagcgttatttcgat
gtcgtgctggctctaaataaatcctggtcactgtgtagtacgctggatgaagctaaacca
ttgcagaaggaactcgcctttttgtcagcggtgaaggttgccatcataaaactgaccacc
acggataaaaaattcagccaatccgagaaaaactcactgctaagccgcattctggataac
gccataatcgcgaccggtgttgacgatgtattcgccctggcaggtctagataagcccaac
atcggcttactttctgatgagtttttacaggaagtgcacgatatgccgcagcgcaatttg
gctgttgaattacttcaaaaacttctgaatgatggtattcatgcccgagcaaataacaac
gttgttcaggagaaaaaatactctgatcgtctgagaacggtgcttctcaaatataataac
cgcgcaattgaaaccgcacaggttattgaagaactgatccagatggccaaagagtttcag
gctgccatggcgcgtgacgatgcactcggtctgaatcctgacgaaattgccttctatgat
gcgttggcggaaaacgaaagtgctgttcgggagctcggggatgatattctcaagaaactg
gcgattgaagtcactttaaaactgcgtcaatccaccaccgttgactggcaggtgcgcgaa
agcgtgcgcgcgcggttgcggatcctggtacgtcagacattacgtaaatataaatatccg
ccagataaaaccgctggtgcagttgagctgatactaaagcaggctgaagtggtttctaat
agctggacggtgtga

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