Prodigiosinella confusarubida ATCC 39006: Ser39006_000165
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Entry
Ser39006_000165 CDS
T05290
Name
(GenBank) DNA polymerase III subunit chi
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera03030
DNA replication
sera03430
Mismatch repair
sera03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ser39006_000165
03430 Mismatch repair
Ser39006_000165
03440 Homologous recombination
Ser39006_000165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sera03032
]
Ser39006_000165
03400 DNA repair and recombination proteins [BR:
sera03400
]
Ser39006_000165
Enzymes [BR:
sera01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Ser39006_000165
DNA replication proteins [BR:
sera03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Ser39006_000165
DNA repair and recombination proteins [BR:
sera03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Ser39006_000165
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_chi
Motif
Other DBs
NCBI-ProteinID:
AUH02687
UniProt:
A0A2I5T1E1
LinkDB
All DBs
Position
38724..39173
Genome browser
AA seq
149 aa
AA seq
DB search
MKNTTFYLLEHDSKSGELSACEALACELAAERWRAGKRILIACEDEQQAIRLDEALWQRD
PHAFVPHNLAGEGPRQGAPVELSWPQRRGNAPRDLLINLQGQFADFATAFHEVIDFVPYE
ESLKQLARDRYKAYRSVGFQLTTATPPTH
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacacaacgttctatcttcttgaacacgacagtaaaagcggcgaactgagcgcc
tgcgaggcactggcctgtgaactggcagcggaacgttggcgtgcgggaaagcgcatactg
attgcctgtgaagatgaacagcaggccatacgactggacgaagcattgtggcaacgagat
cctcacgcctttgtaccgcataacctggcgggagaaggcccacgacaaggcgcaccagta
gaactttcctggcctcagcgccgtggtaatgcaccacgtgatctgctcattaatttgcaa
gggcaattcgcagattttgccaccgctttccatgaagtgatagacttcgtcccttatgaa
gaatctctgaaacagttggcgcgcgatcgctacaaagcctatcgcagcgtcggcttccaa
ttgaccacggcaacaccgccaacccactga
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