Prodigiosinella confusarubida ATCC 39006: Ser39006_000240
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Entry
Ser39006_000240 CDS
T05290
Name
(GenBank) transcription antiterminator
Organism
sera
Prodigiosinella confusarubida ATCC 39006
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Paralog
GFIT
Motif
Pfam:
PRD
HTH_11
Mga
HTH_DeoR
PuR_N
PTS_IIB
PF0610-like_N
HTH_Mga
HTH_6
DUF7123
GerE
HTH_17
HTH_29
HTH_22
HTH_Tnp_1_2
HTH_Tnp_ISL3
Sigma70_ECF
SpoIIID
Motif
Other DBs
NCBI-ProteinID:
AUH02702
UniProt:
A0A2I5T1E7
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Position
57770..59347
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AA seq
525 aa
AA seq
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MMQPLTSRQNRLLKYLLQHQEYVTVKNIAHYLDVSEKTVYRDMQFVETFLSVWNIHPDKK
VGAGIMLTSDDDRGLTLLEQQIVVDDGDTDALINNARRIKIASQLLSDTPHETSINKLSE
RYFISSASIVNDLKIIESWLQPLGLTLVRSQSGTHIEGSESSVRQAMVSLINDVMQHKEP
GHLNHSRLDPGSYKALTNHFGEDDVGFVQTLLQEMEQQLSYTLGEPYYINIFTHTLIMMH
RIAQGKALMMDEDHIHQQVDNRIFSIAKKMVSRIEQRVNNRLPSDEVWFIYQYIISSGIV
MEEREDNQLLRYQFSNEESRQITGTLIHEFSNLVHFDLRDDNILHEGLLIHIKPLLNRLK
YHIHIRNPLLEDIKNEFQDIYQITHQAMNEVCNKFQLAPITEDEIGYLTIHFQATLEQKI
AHKRILVVCSSGVGTSHLLKSRILRAFPDWIIVGVVSASNMVTFCQQENVELIISTIHLE
EQQIPIVYVSAFFNDDDIKRVTKKVIANKLHQAVHQSPTADHSFS
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagccacttacctcgcgccagaaccgattattgaaatatctgttacagcatcaa
gagtatgtaacagttaaaaatattgcacattacctggatgtgtcagaaaagaccgtctat
cgcgatatgcaatttgttgaaaccttcctttctgtctggaatattcatccagacaaaaag
gtcggtgcaggaatcatgctgacttccgatgatgatcggggtttaacattgctggaacag
cagattgttgtagatgacggcgataccgacgcgttgattaacaacgccagacggataaaa
atcgcatcacaactgttgagcgacaccccccatgagacgtcgatcaataaactgtcagaa
cgttattttatcagtagtgcgtcgatcgttaacgatctcaaaatcatcgaaagctggtta
caaccgttgggattaacactggttcgcagccagagcggcacgcatattgaaggcagtgaa
agcagtgtgcgacaagcgatggtctcgttaatcaacgatgtcatgcagcacaaagagccc
ggtcaccttaaccattctcgcctcgatcccggcagctataaagcgctgacaaaccatttc
ggtgaagacgatgtcggttttgtgcaaacactgttgcaggaaatggaacaacagctttcc
tatacgcttggtgaaccttattacatcaatatcttcacccatactttgattatgatgcac
cgtatcgcgcagggaaaagcgttaatgatggatgaagatcatattcatcagcaggttgac
aatcgtatattttctattgcgaaaaaaatggtaagcaggatagaacagcgcgtcaataac
cgtttaccttccgatgaagtctggtttatttatcaatatatcatttcttccggcattgtt
atggaagagcgggaggataatcagcttcttcgttaccaattctccaacgaagaatcacgt
cagataactggcacacttattcatgaattttctaacctggtccactttgatttacgtgac
gacaatatattgcatgaaggactgcttattcacattaaaccgctgcttaaccgattaaaa
tatcacattcatatccgaaatcctttattagaagatatcaaaaatgagtttcaggatatt
taccaaattactcatcaagcaatgaatgaggtttgtaataaattccagctggcacccatt
accgaagatgaaattggttatctgacaatccactttcaggcaacgttagaacagaagatt
gcccataagcgtatcctggtggtctgttccagcggagtcggcacatcgcatctgctgaag
agccgtattctaagagcatttcctgactggattattgtcggtgttgtttcagccagtaat
atggtgaccttttgccagcaggaaaatgttgaactgattatttccaccattcacctggaa
gaacagcagatacccattgtctatgtatccgccttttttaatgacgatgatattaagcgc
gtaacaaaaaaagtcatcgccaataaattgcatcaggccgttcatcaatctcccacggcc
gatcattcattttcttaa
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