Prodigiosinella confusarubida ATCC 39006: Ser39006_000330
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Entry
Ser39006_000330 CDS
T05290
Name
(GenBank) 16S rRNA (cytidine(1402)-2'-O)-methyltransferase
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sera03009
]
Ser39006_000330
Enzymes [BR:
sera01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
Ser39006_000330
Ribosome biogenesis [BR:
sera03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Ser39006_000330
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
UPA
MRM3-like_sub_bind
Motif
Other DBs
NCBI-ProteinID:
AUH02719
UniProt:
A0A2I5TDU2
LinkDB
All DBs
Position
complement(74677..75546)
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AA seq
289 aa
AA seq
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MNQDQQAEISVSTLYIVPTPIGNLGDITQRALAVLKHVDLIAAEDTRHTGLLLQHFAINA
RLFALHDHNEQQKTEQLLTRLQGGMSIALVSDAGTPLINDPGYHLVRRCREAGIRIVPLP
GPCAAITALSAAGIASNRFCYEGFLPAKTKARKDILRELQEEPRTLIFYESTHRLLESLQ
DICEVLGPQRYIVLARELTKTWESIHGAPVGELLHWVLEDENRRKGEMVLIVEGHQPDED
ALPAEALRTMALLREALPLKKAAALAAEIHSVKKNALYRYALEQDGKNE
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaagaccaacaagcagagatttctgtctccaccctgtacattgtgccgacaccc
attggtaatcttggcgatattacccaacgggcactggccgtattgaaacatgtcgatctt
attgcggcagaggatacccggcatactggtttattgttacaacatttcgcaattaatgcg
cgactgttcgcactgcatgaccataatgaacagcagaaaacagaacaattgctaacccgc
ttacagggtgggatgagcatcgcgttggtatcggatgccggaacgcctctgattaacgat
cctggttatcacctggtcagacgttgccgtgaagccgggatccgtatcgtgcccttgcct
ggcccctgcgcggctatcactgcgctttctgcggctggtatcgcatctaatcgtttctgt
tatgaaggttttttgcctgccaaaaccaaagcgcgtaaagacatattacgtgagttgcag
gaagaaccgagaacgctgattttttacgaatcgacacatcgtttgctggagagtttgcag
gatatctgtgaggtattggggccacagcgttatatcgtgttggcgcgtgaactgaccaaa
acctgggagtcaattcatggtgcgccggtaggtgagttgttgcactgggtactggaagat
gaaaaccggcgtaaaggtgagatggtgctgattgttgagggccatcagccggatgaagat
gcgttgccagctgaagcgttaaggacgatggcgttgctgcgggaagcgctacctttgaaa
aaggcggcggcgttggcggcggaaattcacagtgtgaagaaaaatgccttgtaccggtat
gctttggaacaagatggaaaaaacgaataa
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