Prodigiosinella confusarubida ATCC 39006: Ser39006_001340
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Entry
Ser39006_001340 CDS
T05290
Symbol
xylF
Name
(GenBank) D-xylose ABC transporter substrate-binding protein
KO
K10543
D-xylose transport system substrate-binding protein
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Ser39006_001340 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sera02000
]
Ser39006_001340 (xylF)
Transporters [BR:
sera02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
Ser39006_001340 (xylF)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
AUH02901
UniProt:
A0A2I5T1X5
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Position
complement(287223..288221)
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AA seq
332 aa
AA seq
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MKAKHFLLSVCAALAIIAQPGFAKEVKIGMAIDDLRLERWQKDRDIFVQKAEAQGAKVFV
QSANGNEETQMDQIENMINRGVDVLVIIPYNGKVLSNVIAEAKREGIKVLAYDRMINNAD
VDFYISFDNEKVGELQAKYLISKVPQGNYFLMGGSPVDNNAKLFRQGQMKVLKPLIDSGK
IHIVGDQWVDAWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLAGKVA
ISGQDADLAAIKRIVAGTQTMTVYKPISKLAQDAADIAVELGQGKTPKSNATLNNGLKDI
PSFLLTPIPVDKSNIDSTVIADGFQKKSDVYN
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctaaacactttttactgtcagtttgtgccgcacttgccataatcgctcaaccc
gggtttgccaaagaagtaaaaataggtatggcgattgatgatttacgtctcgaacgttgg
caaaaagaccgtgacatctttgtacaaaaagcggaagcacagggggccaaggtttttgtt
caatcggcaaacggtaatgaagagactcagatggatcaaatagaaaatatgatcaatcga
ggcgtcgatgtcctggttattattccttataacggtaaggtattaagtaatgtgattgca
gaagccaaacgagaaggtattaaggttctggcttatgatcgtatgataaataatgccgac
gtggatttttatatttcctttgataatgaaaaggtcggtgagttacaagcgaaatatctg
ataagcaaagtaccccagggtaattattttctgatgggaggctcaccggttgataacaat
gccaaacttttccggcaagggcagatgaaagtcttaaaaccgctgattgatagtgggaaa
attcatattgtcggggaccagtgggtggatgcctggttaccggaaaatgccttgaaaatt
atggaaaatgccctgacggccaataacaataaaattgacgctgttgtcgcctccaatgat
gcgactgctggcggtgcgattcaggcactgtctgcccagggattggcgggcaaggtcgct
atatcgggccaggatgctgacttggcggccataaaacgcattgtagccggtacgcagacc
atgacggtctacaagcctatcagcaagttggcacaagatgccgctgatattgccgtggaa
ctgggacaagggaaaacgccgaagtctaatgccacactcaacaatggcctgaaagatatc
ccttccttcctgctgacacctattcctgtcgataaatcgaatattgacagcaccgtcatt
gctgatggcttccaaaaaaaatcggatgtctataactga
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