Prodigiosinella confusarubida ATCC 39006: Ser39006_001500
Help
Entry
Ser39006_001500 CDS
T05290
Name
(GenBank) glycine--tRNA ligase subunit beta
KO
K01879
glycyl-tRNA synthetase beta chain [EC:
6.1.1.14
]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Ser39006_001500
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sera01007
]
Ser39006_001500
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sera03016
]
Ser39006_001500
Enzymes [BR:
sera01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
Ser39006_001500
Amino acid related enzymes [BR:
sera01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Ser39006_001500
Transfer RNA biogenesis [BR:
sera03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Ser39006_001500
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_synt_2f
DALR_1
Motif
Other DBs
NCBI-ProteinID:
AUH02927
UniProt:
A0A2I5T220
LinkDB
All DBs
Position
complement(323750..325819)
Genome browser
AA seq
689 aa
AA seq
DB search
MTDKTFLVEIGTEELPPKALRNLAQSFADNFTAELDAAGLVYQTVNWFAAPRRLALKVTG
MSAAQPDREVEKRGPAIAAAFGTDGKPTKAAEGWARGCGITVEQAERLETDKGEWLLFRA
QVKGAAAHILLPDMVSNALAKLPIPKLMRWGDKETQFVRPVHTVTMLLGDELVPGTVLGI
DSARTIRGHRFMGESEFTIDNADQYPQILLERGKVMADYDVRKAKIKADAEAAAHKIGGN
ADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYDNNGKLLPN
FIFVANIESKDPQQIIAGNEKVVRPRLADAEFFFNTDRKKRLEDHLPRLQTVLFQQQLGT
LRDKTDRIQVLSGWVAARIGADVEHAKRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHD
GEDENVAVALNEQYQPRFAGDELPSSPVACALAIADKMDTLAGIFGIGQHPKGDKDPFAL
RRAALGALRIIVEKHLPLDLQTLTEEAVRLYGDKLTNINVVDDVIEFMLGRFRAWYQEEG
HSVDTIQAVLARRPTRPADFDARVKAVSHFRTLDAATALAAANKRVSNILAKSTEPLNDN
VQAALLKEKEEIQLATYVTALTSKLAPWFAEGRYQEALVELAQLREPIDSFFDKVMVNAD
DQQVRINRLTLLNELRNLFLKVADISVLQ
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgacagacaagacttttctggtggaaattggcacggaagagctgccgccgaaggctctc
cgtaatttagcgcaatcttttgccgacaactttacggctgaactggatgccgccgggctg
gtttatcaaaccgtgaactggttcgccgccccgcgccggctggcactgaaagtgaccggc
atgagcgccgcgcagcccgatcgtgaagtagaaaagcgtggtccggcgattgccgctgcc
tttggcacggacggtaagccgaccaaagcggctgaagggtgggcacgcggttgtggtatt
accgttgaacaggctgaacgcctggaaacggacaaaggcgaatggttgctgttccgtgcg
caggtaaaaggtgcagcggcgcacatcctgttaccggatatggtcagcaacgcgttggct
aaattgccgatcccgaaactgatgcgttggggtgacaaagaaacccagtttgtacgtccg
gtacacactgtgaccatgctgttgggtgacgaattggtgccgggtacggtgctgggtatt
gattccgcccgtactattcgtggtcatcgctttatgggcgagtcggaattcactatcgac
aatgccgaccagtatccgcagattctgctggaacgcggtaaggtcatggctgactacgac
gttcgtaaagccaaaatcaaagcggatgccgaagctgcggcccacaagattggtggtaac
gccgatctgagcgacagcttgctggaagaagtcacctcgctggtggagtggccagtggtg
ctgacggcgaaatttgaagagaaattcctggcggtaccggcagaagcgctggtgtacacc
atgaagggcgaccagaaatattttccagtgtatgacaataacggcaagttgctgcccaat
ttcattttcgtcgccaatattgagtccaaagatccgcaacagattattgccggtaacgag
aaagtggtgcgcccacgtctggctgatgccgagtttttcttcaataccgaccggaagaaa
cgtctggaagatcatctgccgcgtctgcaaaccgtgctgttccagcagcaactgggtacg
ttgcgcgacaagaccgaccgtattcaggtgttgtctggctgggtagcggcccggattggg
gctgatgttgagcatgcgaaacgcgcaggcttgctgtccaaatgcgacctgatgaccaac
atggtgttcgaattcaccgatacacaaggtgtgatgggtatgcactatgcgcgtcatgac
ggtgaagacgaaaacgtagccgtcgcgctcaacgaacagtatcaaccacgctttgctggt
gatgaactgccgtcttctccggtagcttgtgcgctggcgattgccgataagatggacaca
ctggccgggattttcggtatcggtcagcatccgaaaggtgataaagacccgtttgcctta
cgccgtgcggctcttggcgcgttgcgtatcatcgtggaaaagcatctgccgctggatttg
caaacgctgacggaagaagcggtacgtctgtatggcgacaagttaactaacattaacgtg
gtggacgatgtgatcgaattcatgctaggccgtttccgcgcctggtatcaggaagaaggt
cacagtgtggatactattcaggctgtgctggcgcgtcgtccgacgcgtccggcggacttt
gatgcccgcgtgaaagcggtgagtcatttccgcacgctggatgcggcgaccgcgttggcc
gctgccaataaacgcgtatccaacatcctggcgaaatccacagaacccttgaacgacaat
gtgcaggctgcattactgaaagagaaagaagaaattcagttggcgacgtatgtcaccgca
cttaccagtaagctggcaccgtggtttgctgaagggcgttatcaggaggcgctggtggaa
ctggcgcaattgcgtgaaccgatagatagcttcttcgataaggtaatggttaacgccgat
gatcagcaggtgcgaatcaaccgcctgacgctgctcaacgaactgcgtaacctgttcctg
aaagtggcggatatctctgtattgcagtaa
DBGET
integrated database retrieval system
