Prodigiosinella confusarubida ATCC 39006: Ser39006_001840
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Entry
Ser39006_001840 CDS
T05290
Name
(GenBank) lipopolysaccharide heptosyltransferase RfaC
KO
K02841
lipopolysaccharide heptosyltransferase I [EC:
2.4.99.23
]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera00540
Lipopolysaccharide biosynthesis
sera01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Ser39006_001840
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sera01005
]
Ser39006_001840
Enzymes [BR:
sera01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.23 lipopolysaccharide heptosyltransferase I
Ser39006_001840
Lipopolysaccharide biosynthesis proteins [BR:
sera01005
]
Core region
Ser39006_001840
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
UPF0181
Motif
Other DBs
NCBI-ProteinID:
AUH02990
UniProt:
A0A2I5TEK2
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All DBs
Position
complement(395526..396497)
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AA seq
323 aa
AA seq
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MRVLIVKTSSMGDVLHTLPALTDAMQVIPGIQFDWVVEEGFAQIPAWHPAVDRVIPVALR
RWRKNWFSAAIRQERADFKQQLREKRYDTVIDAQGLIKSAGLVTRLARGNKHGLDWKSAR
EPLASWFYQYRHFIDRQQHAVERIRELFAVSLNYRRPTETGDYAIASRFLSSLPTDAGQY
LVFLHATTRDEKHWPESHWRELIALLQPSGLRIKLPWGAEHEHQRARRLAEGFAYVDVLP
RLNLEQVATVLAGARAVISVDTGLSHLAAALDRPNITLYGPTDPGLIGGYGNNQQICRPE
NSCNLADLHAADVYQHCVSLLTE
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgagggtgttaattgttaaaacttcctcgatgggggatgttctgcatacgctgccggcc
ttaacggatgcgatgcaggtgattcccggcattcagttcgactgggtggtagaagaaggt
tttgcccagatccctgcctggcatcctgccgttgatcgggttatcccggtggcgctgcgg
cgctggcgcaagaactggttcagtgccgctatccgtcaggaacgagcggatttcaagcag
caactgcgagaaaaacgttacgatacggtaattgatgctcaggggctgattaaaagcgcg
gggctggtcacccgtctggcgcggggtaataagcatgggctggactggaaaagtgcccgc
gaaccgcttgccagctggttttaccaatatcgtcactttattgaccggcaacaacacgcg
gtagagcgtatccgtgagctgtttgctgtcagtttgaattatcgtcgaccgacagaaacc
ggtgattatgctatcgcttcgcggtttctttcttccctgccgacggatgccggccagtat
ctggttttcctgcacgccaccacccgtgacgaaaaacactggccggagtcacactggcgc
gaattgatagcgttgctacaacccagtggattgcgtatcaaactaccatggggcgcggaa
catgagcatcagcgcgcacgacggctggcagaagggttcgcgtatgtggatgttttgcct
cggcttaacctggagcaggtggcgacggtgctggcgggcgcgcgagctgtcatctctgta
gatacggggctgagccacttggcggctgcgctggatcgtcccaacatcacgctgtatggt
ccgactgaccccgggctgattggtggttatggtaacaatcagcagatctgccgcccggaa
aatagctgcaatctggcggatctccacgcagccgatgtttatcagcactgcgtatcttta
ctgactgaatga
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