Prodigiosinella confusarubida ATCC 39006: Ser39006_001845
Help
Entry
Ser39006_001845 CDS
T05290
Name
(GenBank) ADP-heptose--LPS heptosyltransferase RfaF
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera00540
Lipopolysaccharide biosynthesis
sera01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Ser39006_001845
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sera01005
]
Ser39006_001845
Enzymes [BR:
sera01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
Ser39006_001845
Lipopolysaccharide biosynthesis proteins [BR:
sera01005
]
Core region
Ser39006_001845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Motif
Other DBs
NCBI-ProteinID:
AUH02991
UniProt:
A0A2I5T265
LinkDB
All DBs
Position
complement(396494..397546)
Genome browser
AA seq
350 aa
AA seq
DB search
MKILVIGPSWVGDMMMSHSLYRTLKAEHPDAIIDVMAPDWCRPLLARMPEVHQALSMPLG
HGALALGERYRLGASLRHTHYDRAYVLPNSLKSALVPFFAAIPRRIGWRGEMRYGLLNDL
RVLNKAAFPLMVQRYVALAYDRKRIRAASDVPQPLLWPQLRVGDEEIAEVTSIFNLPDIR
PLVGFCPGAEFGPAKRWPHYHYGALAQTLIDRGFQVALFGSANDHQAGEDICQSLTDTAQ
EYCINLAGKTSLDQAVVLIAACHAVVSNDSGLMHVAAALNRPLVALYGPSSPDFTPPLSH
QAEVIRLISGYHRVRKGDAEQGYHQSLIDIQPERVLEALARYLPSLGEKA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctggttatcggaccttcctgggtcggcgacatgatgatgtcgcacagtctt
taccgcaccctgaaagccgaacatccggatgccatcattgacgtgatggcaccggactgg
tgccgtccattactggcgcggatgcctgaggttcaccaggcactgtcgatgccattggga
catggggcgttggcgttgggtgagcgctaccgtttaggtgcctcactgcgccatacccac
tacgatcgcgcctatgtgttacctaactcattaaaatccgcactggtgccttttttcgct
gctattccccggcgaatcggctggcgcggagagatgcgctatggtctgcttaacgatctg
cgggtgctgaataaagccgcctttccactgatggttcaacgttatgtggcgttggcttat
gacaggaagagaatccgcgctgccagtgacgtgccgcaaccattactgtggccgcaattg
cgggttggtgatgaagagattgcggaggtgacgtctatctttaatctgcctgacattcgt
ccgttggtcggtttttgccctggtgctgaatttggcccggccaaacgctggccgcattat
cactacggtgcgctggcgcaaacgctgattgaccggggatttcaggtggcgttgttcgga
tccgccaatgaccatcaggcgggtgaggatatttgtcagtcactgacggataccgcccag
gaatattgtattaacctggctgggaaaacgtcgctggatcaggcggtggtgttgattgcc
gcctgtcatgccgtcgtcagtaatgattccggattaatgcatgtggcggcggcgctgaat
cggccactggtggcgttgtacgggcccagtagccctgattttacgccgccgttgtcgcat
caggcggaggtgattcgcttgattagcggttatcaccgggtacgcaagggtgatgccgaa
cagggttatcatcagagcctgattgatattcagccagaacgggtgctggaagcattagcc
cgttatctgccctcgctcggggaaaaggcatga
DBGET
integrated database retrieval system
