Prodigiosinella confusarubida ATCC 39006: Ser39006_002205
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Entry
Ser39006_002205 CDS
T05290
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera03030
DNA replication
sera03410
Base excision repair
sera03420
Nucleotide excision repair
sera03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ser39006_002205
03410 Base excision repair
Ser39006_002205
03420 Nucleotide excision repair
Ser39006_002205
03440 Homologous recombination
Ser39006_002205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sera03032
]
Ser39006_002205
03400 DNA repair and recombination proteins [BR:
sera03400
]
Ser39006_002205
Enzymes [BR:
sera01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Ser39006_002205
DNA replication proteins [BR:
sera03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Ser39006_002205
DNA repair and recombination proteins [BR:
sera03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Ser39006_002205
NER (nucleotide excision repair)
GGR (global genome repair) factors
Ser39006_002205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
HHH_5
WHD_GTF3C1_N
Motif
Other DBs
NCBI-ProteinID:
AUH03055
UniProt:
A0A2I5T2D4
LinkDB
All DBs
Position
complement(479501..482290)
Genome browser
AA seq
929 aa
AA seq
DB search
MAQITENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLLLQYHPSHVAV
VFDAKGKTFRDELFEDYKSHRPPMPDDLREQIEPLHRMVTAMGLPLLVVSGVEADDVIGT
LSLQAERAGIPVLISTGDKDMAQLVTSNITLINTMTNSILGPEEVCNKYGIPPELIIDFL
ALMGDSSDNIPGVPGIGEKTAQALLQGLGGLDSLYENLDKIAGLSFRGAKTIAAKLEQHK
EIAYLSYKLATIKTDVELELNCDQLTVNEPNVVELRDLFGHYEFKRWLIDIESGTWLQDK
KSNLAVPAVIKKMEEKTQEEKVSVLSRDNYVTILDEKTLQDWITRLKSSEVFAFDTETDS
LDTLAANLVGMSFAIKPGEAAYLPLAHDYLDAPEQLDRTKVLAALKPLLEDASLLKIGQN
LKFDKGVMMRHGIELRGIAFDTMLESYVLDSVAGRHDMDSLSARYLNHKTISFEEVAGKG
KNQLTFNQIALEQAAPYAAEDADVTLHLHQKLWEQLKQQPELRKVFQDIDMPLVPVLSRM
ERTGVLIDTTILAEHSRELTQRLAELEVKAYELAGEEFNLSSPKQLGAILYEKLQLPVIK
KTPKGAPSTNEEVLAELALDYPLPKLLLEHRGLAKLKSTYTDKLPLMINPLTKRVHTSYH
QAVTATGRLSSSDPNLQNIPVRNDEGRRIRQAFIAPKGYSIMAADYSQIELRIMAHLSKD
AGLLKAFAEGKDIHRATASEVFGIPLDNVTSEQRRSAKAINFGLIYGMSAFGLSRQLNIP
RKESQRYMDLYFERYPGVQHYMERTRQQAAAQGYVSTLDGRRLYLPDIHSRNAMGRKAAE
RAAINAPMQGTAADIIKKAMIAIDDWLQQQEEPLIKMIMQVHDELVFEVHDSVLDVARQQ
IKALMEGSMQLDVPLLVAVGTGQNWDQAH
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggctcagattactgaaaaccctttgattctggtggatggttcatcctatttatatcgt
gcttatcatgcttttcccccgttaaccaatagcgcaggtgaacctactggggcgatgtat
ggtgtacttaacatgctgcgaagcttattactccagtatcatcccagccatgtggcggtg
gtgtttgatgctaaaggtaaaacgtttcgtgatgaactatttgaagattacaaatctcac
cgtcctccgatgccagacgatctgcgcgaacagatagagcctttacaccgtatggtgacg
gcgatggggttacctttgttggtggtttctggtgtagaggcagatgatgttatcggcact
ctttctttacaagcagaacgagccggtataccggtattgattagtaccggtgataaagat
atggctcagttggttacatccaatatcacgctgatcaatacgatgaccaatagtattctt
ggtcctgaagaagtgtgcaataaatatggtattcctccagagttgattatcgattttctt
gccctgatgggagactcttccgataacattcctggcgtacccgggatcggtgaaaagacc
gcgcaggcgttgttacaaggattgggcggattggattcactgtatgaaaatctggataaa
attgctggtttgtcttttcgtggggcgaaaaccatagcggccaagctagaacagcacaaa
gagatcgcctatctctcctataaattggccactatcaaaacggatgttgaacttgaattg
aattgcgatcaattaactgttaatgagccaaatgttgttgaactgagagatctgtttggt
cattacgaatttaagcgttggttaattgatattgaatccggaacatggttacaggataaa
aaaagtaacctggccgtgccggcagtaataaaaaagatggaagaaaagacgcaagaagaa
aaagtaagcgttctgtctcgagacaattacgtcactattctggatgaaaaaaccttacag
gactggataacgcgtttaaagagctctgaggtgtttgcttttgatacggaaacagacagc
ctggacacccttgctgctaatctggtagggatgtcattcgcgattaaaccgggtgaggct
gcatatctgcccttggctcacgactatctggatgcacctgaacagctcgatcgtacaaag
gtattggccgcactcaaaccgctgctggaagatgccagcttactgaagattggtcagaat
ctaaagtttgataagggtgtgatgatgcgccatggtattgagctacgcggtattgctttt
gataccatgctggaatcctatgtgttggatagtgttgctggccgtcatgatatggacagc
ctgtctgcgcgttatttgaaccacaaaactattagttttgaagaagttgccggaaaaggg
aaaaaccagctaactttcaatcagattgcattggaacaggctgcaccctatgctgctgag
gatgctgacgtcactttgcatctgcaccagaaactatgggaacagctgaagcagcaacct
gaattgcgcaaagtttttcaggatatagatatgccactggtgccggtgttatcccggatg
gaacgcactggggtgctgattgatactactattctggcagagcattcgcgggaactgaca
caacgcctggcggagttggaagtgaaagcgtatgagcttgcaggagaggaatttaattta
tcttcccccaaacaattaggcgctattctttatgaaaaactgcaactgccggttatcaaa
aaaaccccgaagggcgcaccttccaccaatgaagaagtgttggctgagttagcgctggac
taccctttgccaaagcttcttttggaacatcgtgggctggcaaaactgaaatccacttat
accgataaattaccgttgatgattaacccgctaactaaacgagtacatacctcttatcat
caggcagtaacagcaacgggacgtttgtcttccagtgaccctaacttgcagaatattcca
gtccgtaatgatgaaggtcgtcgtattcgtcaggcatttattgcgccgaaaggatacagc
attatggcggcggactactcgcagattgagttgcggattatggcgcacctttctaaggat
gctggattgcttaaggcgtttgcagaaggtaaggatattcaccgcgcaacggcctctgag
gtgttcggtatcccacttgataatgtcaccagcgaacagcggcgaagtgccaaggcaatt
aactttggtttgatttatggtatgagtgcctttgggttatcgcgccagctaaatattccg
cgtaaagaatctcagcgttacatggatctttacttcgagcgttatccaggtgtacagcat
tatatggaacggacacgtcagcaggcggccgcacaaggatatgtgtcgacgctggacggt
cgacgtctctatttaccggatattcactcccgtaacgctatgggccgtaaagcggctgaa
cgagcggcgattaacgcgcctatgcaagggaccgctgcggatattattaaaaaagcgatg
atcgcgattgacgattggttacagcagcaggaagaaccgttaatcaaaatgataatgcag
gtccatgatgaactggtttttgaggtgcatgattccgtattggacgtggccaggcagcaa
attaaagcgctgatggaagggagtatgcaattagacgtgccgttgctggtagctgttggt
actggtcaaaactgggatcaggcgcattaa
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