Prodigiosinella confusarubida ATCC 39006: Ser39006_003565
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Entry
Ser39006_003565 CDS
T05290
Name
(GenBank) DNA-binding transcriptional regulator CytR
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sera03000
]
Ser39006_003565
Transcription factors [BR:
sera03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Ser39006_003565
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Crp_2
HTH_Tnp_ISL3
MarR_2
HTH_AsnC-type
HTH_24
HTH_91
Motif
Other DBs
NCBI-ProteinID:
AUH03296
UniProt:
A0A2I5T376
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Position
complement(770356..771399)
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AA seq
347 aa
AA seq
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MEQKRENTTATMKDVADMAGVSTATVSRALMSPEKVSAPTRQKVEQAVLSVGYSPHSITR
NLKRNESRTLLAIVPDICDPFFSEILRGIEETATERGYLVLIGDCAHQRQNDKTFFDLII
TKQIDGMLLLGSDLPFDVSKAEQRNLPPMVMANEFAPELELPTVHIDNLTAAFDAVHYLH
QLGHQRIACIAGPEHLPQSQYRLQGYIQALRRCGLTIDNQYIVRGDFTYETGMKGLTTLM
SHPAPPSAIFCHSDIMALGVLSQARRVGLDIPRDLSLVGFDNITQASYCFPPLTTVAQPR
YDIGREATLLLLEQLYGHSVQSGSRLLASELVIRESTSPPNSTHNRL
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
ttggagcaaaagagagaaaacaccacagcgaccatgaaggacgttgcggatatggcaggg
gtttctacagccactgtatctcgggcgttgatgagcccggaaaaagtatctgccccaacc
cggcaaaaagtggagcaggccgtactgtcggtgggctattctcctcattcgattacccgc
aacctcaagcgtaatgaatccagaacccttctggcgattgtgcccgacatatgtgaccct
ttcttctcggaaatattgagaggcatcgaagaaactgcgactgaacgtggttacctggta
ctgattggtgactgcgcccatcagcgtcaaaacgataaaacttttttcgacctgattatc
accaaacagattgacggtatgttactactgggctctgacctgccgtttgatgtcagtaaa
gctgaacagcgcaatcttccaccaatggtgatggccaacgaatttgctcccgagctggaa
ttaccgacagtgcatattgataatctgacagcggcgttcgatgcggtgcattatctccat
cagttgggacatcaacgaatcgcatgtattgccggaccagaacatctgccacagagccag
taccgtttacaaggctatatccaggcattgcgtcgctgtgggttaaccatcgataaccag
tacatagtgcgaggcgacttcacttatgaaaccggtatgaagggattgaccacgctaatg
tcgcatccagcgcctcccagtgctattttttgccatagcgacatcatggcgttgggagta
ttgtcccaggccagaagagtggggttggatattccccgagatctctcattggtggggttt
gataatattactcaggccagttactgctttccgccactcaccactgtagctcaaccacgc
tatgacatcgggcgtgaagctacgctattgttgctggagcagttatatggtcattctgtc
cagagtggatcacgtctgctggctagtgagttggtcattcgggaaagtacctccccgcct
aattccacacataaccggctttaa
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