Prodigiosinella confusarubida ATCC 39006: Ser39006_004185
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Entry
Ser39006_004185 CDS
T05290
Name
(GenBank) transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sera03000
]
Ser39006_004185
Transcription factors [BR:
sera03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Ser39006_004185
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
LacI
Peripla_BP_4
HTH_3
HTH_23
HTH_10
HTH_7
Motif
Other DBs
NCBI-ProteinID:
AUH06720
UniProt:
A0A2I5TCX5
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All DBs
Position
908381..909376
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AA seq
331 aa
AA seq
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MKKKRPVLQDVADRVGVTKMTVSRYLRHPSQVSPALQKKIAIVLDELGYIPNRAPHILAS
ATSRAIGVLLPSLTNQVFAEVLRGIERVADAHGYQTMLAHYGYDPEKEEQRLMSLLSYNI
DGLILAERTHTVRTRQMIEVAGIPVVELMDSVSPCLDLAVGFDNVEAARQMTHYMIDRGY
RHAVYLGARLDERTLMKREGYEQAMQAAGLVSHCVMSEIASSYSLGGELLRQAQAEYPQV
DSVFCTNDDLAVGAMFECVRQGLRIPQDMGIAGFHGHDIGQAMVPRLSSVLTPRERMGEI
GAERLLARLRGEQITPAVEDVGFTLLAGESL
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
ataaagaagaaaagaccggtactccaggatgtcgccgaccgagttggtgtcaccaaaatg
acggttagccgttatctgcgccatccttctcaggtttccccagcgttgcagaaaaagatc
gccatagtgcttgatgaactgggctacattcccaatcgtgcgccacacattctggccagt
gccaccagccgggcgattggcgtgttgctgccctcgttgaccaatcaggtatttgccgag
gtgttgcgtggcattgagcgggtggcggatgctcatgggtatcaaacgatgctggcgcat
tacggttacgaccctgagaaggaggaacagcggctgatgtcgttactgtcttataatatt
gacggactgattttggccgagcgtacacatactgtccgtacccgtcagatgattgaagtg
gcggggattccggtagtggaactgatggattcggtttcaccttgtctcgatttggccgtc
gggtttgataatgtggaggccgcccggcagatgacgcactatatgattgaccggggctat
cgtcatgctgtgtatctgggcgcacggttggatgaacgcactctcatgaaacgtgaaggt
tatgagcaagccatgcaagcggctggtctggtcagccactgtgtcatgagtgaaattgcg
tcgtcatattcgctgggaggcgagctgctgcgccaggcgcaggcggaatatccccaggtg
gatagcgtattctgcaccaatgatgatctggcggtcggcgcgatgtttgaatgtgtacgg
cagggattacgtatcccgcaggatatgggcattgccggttttcacggtcacgatattggc
caggcaatggtgccccggttgtccagcgttctgacaccgcgtgagcgcatgggggaaatc
ggtgctgaacgtttgctggcgcgtttgcgtggagagcagattacgccagcggtggaagat
gttggttttacgctgttggcaggggaaagtttgtag
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