Prodigiosinella confusarubida ATCC 39006: Ser39006_004945
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Entry
Ser39006_004945 CDS
T05290
Name
(GenBank) isocitrate lyase
KO
K01637
isocitrate/methylisocitrate lyase [EC:
4.1.3.1
4.1.3.30
]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera00630
Glyoxylate and dicarboxylate metabolism
sera00640
Propanoate metabolism
sera01100
Metabolic pathways
sera01110
Biosynthesis of secondary metabolites
sera01120
Microbial metabolism in diverse environments
sera01200
Carbon metabolism
Module
sera_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Ser39006_004945
00640 Propanoate metabolism
Ser39006_004945
Enzymes [BR:
sera01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.1 isocitrate lyase
Ser39006_004945
4.1.3.30 methylisocitrate lyase
Ser39006_004945
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Gene cluster
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Motif
Pfam:
ICL
PEP_mutase
NDUS4
Motif
Other DBs
NCBI-ProteinID:
AUH03534
UniProt:
A0A2I5TG33
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All DBs
Position
1048153..1049463
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AA seq
436 aa
AA seq
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MSTSRTQQIQQIEEEWKNERWEGITRPYRAEDVVNLRGSVNPESTLAQLGAAKLWKLLHD
GKSRKGYVNCLGALTGGQALQQAKAGLEAVYLSGWQVAADANLASSMYPDQSLYPANSVP
SVVQRINNTFRRADQIQWANGIGPDDPRYTDYFLPIVADAEAGFGGVLNAFELMKSMIEA
GAAAVHFEDQLASVKKCGHMGGKVLVPTQEAIQKLVAARLAADVLGVPTLLVARTDADAA
DLLTSDCDDYDKDFVTGERTVEGFYRTRAGVEQAISRGLAYAPYADLVWCETSTPDLGLA
RRFAEAIHAKFPGKLLAYNCSPSFNWKKNLDDRTIACFQDELSEMGYKYQFITLAGIHSM
WFNMFDLAHAYAQGEGMKHYVEKVQQPEFAASQEGYTFVSHQQEVGTGYFDKVTTIIQGG
ASSVTALTGSTEEQQF
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgagtacctctcgtacccaacaaatacagcaaattgaagaagagtggaaaaatgagcgt
tgggaaggcatcacccgtccttatcgcgctgaagatgtcgttaatcttcgcggttcggtc
aacccggaaagtacgttggctcaattgggtgcggccaaactgtggaaactcctgcacgat
ggtaagtcacgcaaaggctatgtgaactgcctgggagcattgacaggaggacaggcattg
caacaggccaaagccgggttagaggcggtatatctttccggctggcaggtggccgccgat
gccaatctggcatccagtatgtatcccgaccagtcactgtacccggccaactcggtaccg
tctgtggtgcagcgcattaacaatacattccgtcgcgctgaccagattcagtgggctaac
ggtatcgggccagacgatccgcgttataccgattatttcctgccgattgtcgcggatgct
gaagcgggttttggtggtgttctgaatgcgtttgaattgatgaaatccatgattgaggcc
ggggcggcggcagtccattttgaagaccaattggcctcggtgaagaagtgcggtcacatg
gggggcaaagtattggtgccgacgcaggaagctatccagaaactggtggcagcccgtctg
gcggcggatgtgctgggtgtgccaacgctgttggttgcgcgtaccgatgcggatgcggcc
gatctgctgacctctgactgtgatgattacgataaggactttgttaccggtgagcgcacg
gtggaaggtttctaccgtacccgggccggtgtcgaacaggctatcagtcgtgggctggcg
tatgcgccttatgccgatttggtatggtgtgaaacctcgacacccgatctggggttggca
cgtcgctttgccgaggctattcatgcaaaattccctggtaaattgctggcctataactgt
tcaccgtcgttcaactggaaaaagaatctggatgaccggactattgcctgcttccaggat
gagttgtcggagatgggttataagtaccagttcattacgttggcagggattcatagtatg
tggttcaacatgtttgatctggcccatgcctatgcccagggcgaaggtatgaagcactat
gtggaaaaagtgcagcaacctgagtttgctgcgagtcaggagggttatacctttgtctca
caccagcaggaagtgggtactggctactttgataaggtgacgacgattattcagggcggg
gcttcttcggtcaccgcgctgacgggatcaacggaagagcagcagttttga
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