Prodigiosinella confusarubida ATCC 39006: Ser39006_005220
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Entry
Ser39006_005220 CDS
T05290
Name
(GenBank) succinate dehydrogenase/fumarate reductase iron-sulfur subunit
KO
K00245
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera00020
Citrate cycle (TCA cycle)
sera00190
Oxidative phosphorylation
sera00620
Pyruvate metabolism
sera00650
Butanoate metabolism
sera00720
Other carbon fixation pathways
sera01100
Metabolic pathways
sera01110
Biosynthesis of secondary metabolites
sera01120
Microbial metabolism in diverse environments
sera01200
Carbon metabolism
sera02020
Two-component system
Module
sera_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sera_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sera_M00150
Fumarate reductase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Ser39006_005220
00620 Pyruvate metabolism
Ser39006_005220
00650 Butanoate metabolism
Ser39006_005220
09102 Energy metabolism
00190 Oxidative phosphorylation
Ser39006_005220
00720 Other carbon fixation pathways
Ser39006_005220
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Ser39006_005220
Enzymes [BR:
sera01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Ser39006_005220
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Paralog
GFIT
Motif
Pfam:
Fer2_3
Fer4_10
Fer4_8
Fer4_17
Fer4_7
Fer4_9
Fer4_16
Fer4_18
Fer4
Fer4_2
Fer4_4
Fer4_21
Fer2
Fer4_6
Fer4_3
Motif
Other DBs
NCBI-ProteinID:
AUH03585
UniProt:
A0A2I5T3X3
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All DBs
Position
complement(1113976..1114710)
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AA seq
244 aa
AA seq
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MAEMQTLKMEVMRYNPEQDNAPHAEIYEVPYNKQTSLLDALGYIKDNLAPDLSYRWSCRM
AICGSCGMMVNNVPKLACKTFLRDYPNGVKVEALGNFPIERDLVVDMTHFIESLEAIKPY
IIGNDRKPEQGPNKQTPAQMAKYHQFSGCINCGLCYAACPQFGLNPEFIGPAAITLAHRY
NLDNRDHGKKERMPQLNGDNGVWTCTFVGYCSEVCPKHVDPAAAIQQGKVESAKDFMIAM
LKPQ
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggctgagatgcaaacgctaaaaatggaagtcatgcgctataacccggagcaggacaac
gcgccgcacgctgaaatctatgaagtgccctataacaaacagacctctttgctggatgcg
ctgggctacattaaagacaacctggcaccggacctgtcttatcgctggtcctgccggatg
gcgatttgcggctcctgcggcatgatggtcaacaacgtgccaaaactggcctgtaaaacc
tttctgcgtgactaccccaacggcgtgaaagtggaagcactgggtaacttcccgattgaa
cgcgacctggtggtggatatgactcattttattgagagtctggaagctatcaaaccgtac
atcatcggtaatgaccgtaaaccggaacaggggcctaacaagcagaccccggcacagatg
gccaaataccatcagttctccggctgtatcaactgtggattgtgctatgccgcctgcccg
cagttcggtctgaatcctgaatttatcggtccggccgctattacactggcacatcgctac
aacctggataaccgtgatcacggcaaaaaagaacgcatgccgcagttgaacggtgataac
ggggtgtggacctgtacctttgttggttactgctcggaagtgtgtccgaagcatgtcgat
cctgccgctgccatccaacagggcaaggtcgaaagcgctaaagacttcatgattgccatg
ctgaaaccacaataa
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