Prodigiosinella confusarubida ATCC 39006: Ser39006_005250
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Entry
Ser39006_005250 CDS
T05290
Name
(GenBank) small ribosomal subunit biogenesis GTPase RsgA
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera00730
Thiamine metabolism
sera01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Ser39006_005250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sera03009
]
Ser39006_005250
Enzymes [BR:
sera01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
Ser39006_005250
Ribosome biogenesis [BR:
sera03009
]
Prokaryotic type
GTPases
Ser39006_005250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
GTP_EFTU
AAA_16
MMR_HSR1
FeoB_N
AAA_29
MMR_HSR1_Xtn
ABC_tran
nSTAND1
Motif
Other DBs
NCBI-ProteinID:
AUH03590
UniProt:
A0A2I5TGB0
LinkDB
All DBs
Position
complement(1122507..1123556)
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AA seq
349 aa
AA seq
DB search
MSKKKLSKGQQRRVSANHQRRLKHADNKIEWDDNQLSEAQEGIIISRFGMHADVEAVDGT
LHRCNLRRTISSLVTGDRVVWRAGNEALSGISGIVEAVHPRQSVLTRPDYYDGIKPIAAN
IDQIVIVSSILPELSLNMIDRYLVACETLEVEPMLVLNKIDLLDDESLKFVEKLMDIYRA
LHYRVLMVSSHTQQGIPELEAALTGRISIFAGQSGVGKSSLLNSLLYPGAARIVVNDVSG
NSGLGQHTTTASRLYHFPSGGDVIDSPGVREFGLWHLNPEQVTQGFIEFRNYLGNCKFRD
CKHNNDPGCAIRAALERGEIAAERFENYHSILDSMAQVKTRKSFSDSDN
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaaaaagaaactgtcgaaaggtcagcagcgtagggtcagcgccaatcatcagcgc
cgcctgaagcacgcggataacaagatagaatgggatgacaaccaactgagtgaagctcag
gaaggcatcatcatcagtcgttttggcatgcatgccgacgtggaagccgtcgacggcacg
ctacatcgctgtaatcttcgccgcaccatttcgtcattggtcaccggagaccgcgtagtc
tggcgtgccggcaatgaggcgctgtccggcatcagcggtatcgtggaagccgtacaccca
cgccagtcggtactgactcgtcccgattattatgacggtattaaaccgattgccgccaat
attgatcagatcgtgatcgtgtcctctatcctccccgaactgtctttaaatatgatcgac
cgctatctggtggcttgcgaaacactggaagtcgagccgatgctggtgctgaacaaaatc
gatctgctggacgacgagtccctgaaattcgtggaaaaactgatggatatttaccgtgca
ctgcactatcgggtgttgatggtttccagccacactcagcagggtattccggaactggaa
gccgcgttgaccggacggatcagtatctttgccggtcagtccggggtaggaaaatccagt
ctgctcaactcgctgctctatccaggggccgcacgcatcgtggtcaacgatgtgtccggc
aattctggattaggtcaacacaccacaacagcgtcccgtctgtaccattttccgagtggc
ggtgatgttatcgattctcccggcgtgcgggagttcggtctctggcatctgaatccggaa
caggtgactcagggttttatcgaattcaggaattacctcggcaattgtaaattccgcgac
tgcaaacacaataacgacccaggctgtgccatccgtgcggcactggaacggggtgagatt
gcggcggagcggtttgaaaattaccacagtatcctggacagcatggcacaggtaaaaacg
cgtaaatccttttccgattcagataactga
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