Prodigiosinella confusarubida ATCC 39006: Ser39006_005270
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Entry
Ser39006_005270 CDS
T05290
Name
(GenBank) GntR family transcriptional regulator
KO
K23015
GntR family transcriptional regulator, transcriptional activator for L-galactonate catabolism
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sera03000
]
Ser39006_005270
Transcription factors [BR:
sera03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Ser39006_005270
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GntR
FCD
HTH_Crp_2
HTH_24
Phage_rep_O
Rrf2
HVO_A0261_N
HTH_11
HTH_IclR
HTH_DeoR
HTH_3
HTH_36
CENP-B_N
HTH_29
HTH_28
HTH_23
Penicillinase_R
MarR_2
HTH_Tnp_ISL3
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
AUH03593
UniProt:
A0A2I5T3Z4
LinkDB
All DBs
Position
complement(1126447..1127346)
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AA seq
299 aa
AA seq
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MSRSQNLRHNVINQIIDGMVRGHIPSPLPSQSALAEMYNISRTTVRHILNHLTEQGVLAQ
VGRDYSIIRTPGHHDGFECISAPLDEQNRIFEQAFFNMINQRQLKSGETFSELQLARAAG
VSPVVVREYLLKFCRYNLIVSERRGQWSMKQFDQSYAEQLFELREMLEIHSLQHFLNRPE
HDPLWLEAKALLERHRLLRDSIGDNYRMFSQLDRDFHALILSAAKNTFFNQSLEIISVIF
HFHYQWDESDLKQRNIIAVDEHMTILSALICRNDLDATLALRNHLETAKQSMIRSINQY
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgagccgctcacaaaatctccgccacaacgtgattaaccagattattgacgggatggtc
cgcggccatatcccttcaccgctaccttcccagtcggcattggccgaaatgtacaatatc
agccgcaccaccgtccgccatattttaaaccacctcacggaacaaggcgtcttggcgcaa
gtaggcagggactacagcatcatacgaacacctgggcaccatgacggttttgagtgcatt
tccgcgccgctggacgaacaaaaccggatttttgagcaggcttttttcaatatgatcaat
cagcgccagctaaaaagtggtgaaacattctctgaactgcaactggccagagccgctggc
gttagcccggtcgtggtacgcgaatatctgctgaaattttgccgctacaatctgatcgtc
agtgaacgtcgcggtcagtggagcatgaaacagtttgatcagtcgtatgctgaacaactc
tttgaattacgtgaaatgctggaaatccattcattacaacactttctgaaccggccagaa
catgatccattatggctggaggccaaagccctgcttgaacgccaccgattgttacgtgac
agcattggcgacaattaccgcatgttctcccagcttgaccgtgattttcacgctctgatc
ctttccgctgctaaaaatacgtttttcaatcaatcccttgagatcatatctgttattttc
cattttcattatcagtgggatgagagtgatttaaaacaacgcaacattattgctgttgat
gaacacatgaccatcctcagcgccttgatctgccgtaacgacctggatgccacgctggca
ttgcgtaatcatctggaaaccgcaaaacaatcgatgattcgttccatcaatcaatattga
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