Prodigiosinella confusarubida ATCC 39006: Ser39006_005330
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Entry
Ser39006_005330 CDS
T05290
Symbol
nifH
Name
(GenBank) nitrogenase iron protein
KO
K02588
nitrogenase iron protein NifH
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera00625
Chloroalkane and chloroalkene degradation
sera00910
Nitrogen metabolism
sera01100
Metabolic pathways
sera01120
Microbial metabolism in diverse environments
sera01310
Nitrogen cycle
Module
sera_M00175
Nitrogen fixation, nitrogen => ammonia
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
Ser39006_005330 (nifH)
09111 Xenobiotics biodegradation and metabolism
00625 Chloroalkane and chloroalkene degradation
Ser39006_005330 (nifH)
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Gene cluster
GFIT
Motif
Pfam:
Fer4_NifH
CbiA
AAA_31
ParA
ArsA_ATPase
MeaB
DUF87
SRP54
MipZ
AAA_22
RNA_helicase
CBP_BcsQ
AAA_24
AAA_25
CLP1_P
nSTAND3
AAA_10
VirC1
ATP_bind_1
AAA_19
NACHT
FtsK_SpoIIIE
NPHP3_N
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AUH03604
UniProt:
A0A2I5T3Z1
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All DBs
Position
1142261..1143142
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AA seq
293 aa
AA seq
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MAMRQCAIYGKGGIGKSTTTQNLVAALAEMEKKVMIVGCDPKADSTRLILHAKAQNTIME
MAAEVGSVEDLELEDVLQIGYGGVRCAESGGPEPGVGCAGRGVITAINFLEEEGAYGGEL
DFVFYDVLGDVVCGGFAMPIRENKAQEIYIVCSGEMMAMYAANNISKGIVKYAKSGKVRL
GGLICNSRQTDREDELIIALAEKLGTQMIHFVPRDNIVQRAEIRRMTVIEYDPTCSQANE
YRTLANKIVNNTNMVVPTPVTMDELEALLMEFGIMEEEDTEIIGKTAAEEKAA
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgcgtcaatgtgccatttatggcaaaggtggtatcggtaaatccaccactact
cagaatctggtcgccgctctggcggaaatggaaaagaaagtcatgattgtcggctgtgac
cccaaagctgactccacccgattgatcctccacgccaaggctcagaacaccattatggaa
atggcggcggaagtcggttcggtagaagatctggaactggaagatgtactacagatcggc
tacggcggtgttcgttgtgctgaatccggtggtccggagcctggtgttggttgcgctggt
cgcggcgttatcaccgcgatcaactttctggaagaggagggcgcctacggcggggaactc
gattttgtgttctacgacgtactgggcgacgtggtatgtggtgggttcgccatgccgatt
cgtgaaaacaaggcgcaggaaatctatatcgtctgctctggtgaaatgatggcgatgtac
gccgccaataacatttccaaaggtatcgtgaaatatgccaaatccggcaaagtacggttg
ggtgggctgatctgtaattctcgtcagactgaccgggaagatgaactgatcatcgcgctg
gcggaaaaactgggtacgcagatgatccattttgtgccccgcgacaacatcgtacagcgt
gctgaaattcgccggatgacggttatcgagtatgacccgacctgtagccaggccaatgaa
taccgcacgctggcgaacaaaatcgtcaataacaccaacatggtggtgccgacgccagta
acgatggatgagctggaagcgctgttaatggagttcggcattatggaagaagaagatacc
gagatcattggcaaaactgccgcggaagaaaaagccgcctga
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