Prodigiosinella confusarubida ATCC 39006: Ser39006_005550
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Entry
Ser39006_005550 CDS
T05290
Name
(GenBank) N-acetylmuramoyl-L-alanine amidase AmiB
KO
K01448
N-acetylmuramoyl-L-alanine amidase [EC:
3.5.1.28
]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
Ser39006_005550
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sera01011
]
Ser39006_005550
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sera03036
]
Ser39006_005550
Enzymes [BR:
sera01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.28 N-acetylmuramoyl-L-alanine amidase
Ser39006_005550
Peptidoglycan biosynthesis and degradation proteins [BR:
sera01011
]
Peptidoglycan biosynthesis and degradation
Amidase
Ser39006_005550
Chromosome and associated proteins [BR:
sera03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Ser39006_005550
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase_3
LysM
LysM3_LYK4_5
AMIN
NMB0315_dom_I
LysM1_NFP_LYK
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
AUH03640
UniProt:
A0A2I5TGG4
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All DBs
Position
1188541..1190205
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AA seq
554 aa
AA seq
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MINRLIKVLFCVSLMFANPLWAANLSDIKVNNASGQATVSLRFSGQPIYAFFSLHNPDRV
VIDVRQSGLIQGLPLKFSGQNMISRIRSSKAKDAQSLRLVLELTGRAKTRAVTQKTGSDY
TVVFTVTGERKAVVNNPITSISRSEPQTDRRRVPFNAKPTTTADRNTTSARVPARRVGDE
KIVIAIDAGHGGQDPGATGPDGLHEKNVTIAIARKLKAIMERDPMFKPVLTRDGDYFISV
MGRSEVARKQGANLLVSIHADAAPNHNATGASVWVLSNRRANSEMANWLEQHEKQSELLG
GAGDLLANSRADPYLSQAVLDLQFGHSQRVGYDVAVKVLRELHRIGRLHKQRPEYASLGV
LRSPDIPSLLVETGFISNAAEERLLGSDAYQEKIANAIYRGLRSYFLAHPLQSAPKPEKR
PSILPTVKSSVSATSGRYPSRNTVRHTVSRGETLSGIAVRYGVSMAAIRDTNHLKKDVVW
VGQRLTIPVADNRVANVKSATKKVATVVKHKVERGDSLSSIATRYGVSMKEIQQANDMAS
NRVLLGQTLIIPSV
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgataaaccggttgattaaagtcttattctgcgtgtcattgatgtttgccaacccgtta
tgggcggctaacctttcggatatcaaggtcaataatgcctctgggcaggcaacggtgagc
ctcaggttcagtggacagcctatttatgcttttttctcgttgcacaatccggaccgggta
gtgattgatgtacgccagtctggccttattcaagggttgccgttgaaattcagtggccag
aacatgatttcccgtattcgtagtagcaaggcgaaggatgcgcaaagtctccggctggtg
cttgaattgactggtcgggctaaaacgcgagcggttacgcaaaaaaccggttcagactat
accgtggttttcaccgtgactggcgagagaaaagcggttgtcaataatccaataacctcg
atatcgcgtagtgaaccccaaactgatcgcagacgtgttccattcaatgctaaaccgacg
acgacggcggacaggaacacgacgtcggcccgggttcctgcccgtcgtgtgggcgatgaa
aaaattgtgattgcgattgatgccgggcatggtggtcaggatccaggtgcgacggggccc
gacggcttgcatgaaaaaaacgtcaccatagcgattgcccgaaaactaaaggctatcatg
gagagggacccgatgtttaaaccggtactgactcgtgatggcgactactttatttctgtg
atggggcgttccgaagtagcccgtaagcaaggggccaacttgttggtgtctatccatgcg
gatgcggcgccaaaccataatgctaccggtgcctcggtctgggtattgtcaaaccgacga
gctaacagcgagatggccaactggctcgaacagcatgaaaaacagtctgagctattgggc
ggtgccggcgatctattggcaaacagtagagccgatccctatctgagtcaggcagtactg
gatttgcagtttggtcattcacagcgtgttggttatgacgttgccgtcaaagtattgcgt
gaattgcaccgtattggccgtttgcataaacaacgtccggaatacgcgagtctcggtgta
ttacgatcgccggatatcccttcacttctggtggaaaccggttttatttccaatgcggct
gaagaacgattattgggtagcgatgcctatcaggaaaaaatcgctaatgccatctatcgg
gggctgcgcagttatttcctggcacatccattacaatcggctccaaagccggaaaaacga
ccatccatactgccgacagtgaagtcttccgtttctgcgacgtccggcagataccccagc
cgtaatacagtgcgtcatacggtgtcacggggggaaacgttatccggaattgctgttcgt
tatggtgtcagtatggcggcgatacgtgataccaatcacctgaagaaagatgtggtctgg
gttgggcagcgattaacaatcccggtggctgacaaccgtgtcgccaatgtgaagtctgcc
accaaaaaagtggcaactgtggtaaaacacaaagtagaaagaggggatagcctgagttct
atcgccacccgttatggtgtcagcatgaaagaaattcagcaggctaatgatatggcatca
aaccgggtattactgggccagacgctaattattccttccgtctga
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