Prodigiosinella confusarubida ATCC 39006: Ser39006_006300
Help
Entry
Ser39006_006300 CDS
T05290
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera00010
Glycolysis / Gluconeogenesis
sera00020
Citrate cycle (TCA cycle)
sera00260
Glycine, serine and threonine metabolism
sera00280
Valine, leucine and isoleucine degradation
sera00310
Lysine degradation
sera00380
Tryptophan metabolism
sera00620
Pyruvate metabolism
sera00630
Glyoxylate and dicarboxylate metabolism
sera00640
Propanoate metabolism
sera00670
One carbon pool by folate
sera00785
Lipoic acid metabolism
sera01100
Metabolic pathways
sera01110
Biosynthesis of secondary metabolites
sera01120
Microbial metabolism in diverse environments
sera01200
Carbon metabolism
sera01210
2-Oxocarboxylic acid metabolism
sera01240
Biosynthesis of cofactors
Module
sera_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sera_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sera_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
sera_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Ser39006_006300 (lpdA)
00020 Citrate cycle (TCA cycle)
Ser39006_006300 (lpdA)
00620 Pyruvate metabolism
Ser39006_006300 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
Ser39006_006300 (lpdA)
00640 Propanoate metabolism
Ser39006_006300 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Ser39006_006300 (lpdA)
00280 Valine, leucine and isoleucine degradation
Ser39006_006300 (lpdA)
00310 Lysine degradation
Ser39006_006300 (lpdA)
00380 Tryptophan metabolism
Ser39006_006300 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Ser39006_006300 (lpdA)
00670 One carbon pool by folate
Ser39006_006300 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sera04147
]
Ser39006_006300 (lpdA)
Enzymes [BR:
sera01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
Ser39006_006300 (lpdA)
Exosome [BR:
sera04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
Ser39006_006300 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_oxidored
Pyr_redox_3
GIDA
FAD_binding_2
HI0933_like
NAD_binding_8
Thi4
FAD_binding_3
DAO
AlaDh_PNT_C
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AUH03779
UniProt:
A0A2I5TGU9
LinkDB
All DBs
Position
1364786..1366213
Genome browser
AA seq
475 aa
AA seq
DB search
MMSTEIKAQVVVLGAGPAGYSAAFRCADLGLDTVLVERYATLGGVCLNVGCIPSKALLHV
AKVIEEAKALAEHGIVFGEPQTDIDKIRTWKEKVINQLTGGLAGMAKGRKVKVINGLGKF
TGPNTLVVDGENGKTTVNFDNAIIAAGSRPIQLPFIPHEDPRIWDSTDALELKTVPGRML
LMGGGIIGLEMGTVYHALGSQIDVVEMLDQVIPAADKDVVKVFTKRISKKFTLMLETKVT
AVEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPNGKLLDAGQAGVEVDDRGFIHVDK
QMRTNVPHIYAIGDIVGQPMLAHKGVHEGHVAAEVIAGKKHYFDPKVIPSIAYTEPEVAW
VGLTEKEAKEKGISYETATFPWAASGRAIASDCADGMTKLIFDKETHRVIGGAIVGTNGG
ELLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEIFEGSITDLPNPKAKKK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtactgaaattaaagctcaggtggtggtgcttggcgcgggtcctgcaggatat
tctgcagcattccgttgcgcagatttaggtctggacaccgtactggtagaacgttatgcc
accctgggtggtgtgtgtctgaatgtaggttgtatcccctcgaaagcattactgcacgta
gctaaagtcattgaagaagccaaagcgctggcggaacacggcattgtgtttggtgaaccg
cagactgacatcgacaaaattcgtacttggaaagaaaaagtcatcaaccagctgacgggt
ggtctggctggtatggcgaaaggccgtaaagttaaagtgattaacggtctgggtaaattt
accggcccgaatacgctggttgtcgatggtgaaaacggcaaaactaccgttaatttcgat
aacgccattatcgcggcaggttcccgtccgattcagttgccattcattccacatgaagac
ccacgcatatgggattctactgatgcgctggagctgaaaaccgtgccagggcgcatgctg
ctcatgggcggcggtatcatcggtctggaaatgggtactgtttatcatgcgcttggttca
cagatcgacgtagttgaaatgttggatcaagtcattccggcagcggataaagatgtcgtt
aaagtgtttaccaaacgcatcagcaagaaattcaccctgatgttggaaaccaaagtgacc
gccgtcgaagccaaagaagatggtatctatgtcacaatggaaggcaaaaaagcgcctgcc
gaaccacagcgttatgacgcagtgctggtcgcgattggccgcgtaccaaatggtaaactg
ctggatgcaggtcaggctggcgtggaagtcgacgatcgtggtttcattcatgtcgacaaa
cagatgcgtaccaacgtacctcacatctatgctattggcgacatcgtaggtcagcctatg
ctggcgcataaaggtgtacatgagggacatgtggcagctgaagttatcgctggcaagaag
cattacttcgacccgaaagtcatcccgtccattgcttacactgaaccagaagtggcgtgg
gtgggcttgaccgagaaagaagccaaagagaaaggcatcagctacgaaaccgcaactttc
ccatgggctgcctctgggcgtgccattgcctctgattgcgcagatggtatgaccaaactg
attttcgacaaggaaacccatcgtgttattggtggcgcgattgtcggtactaacggtggt
gagctgttgggtgaaatcggtctggcgattgagatgggttgcgatgcggaagatatcgca
ctgactattcatgcgcatccgacgttgcatgaatctgttggtctggcggccgagattttc
gaaggcagcattactgacctgccgaatccgaaagcaaaaaagaaataa
DBGET
integrated database retrieval system
