KEGG   Prodigiosinella confusarubida ATCC 39006: Ser39006_008360
Entry
Ser39006_008360   CDS       T05290                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
sera  Prodigiosinella confusarubida ATCC 39006
Pathway
sera02024  Quorum sensing
sera03060  Protein export
sera03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sera00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Ser39006_008360
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Ser39006_008360
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Ser39006_008360
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sera02044]
    Ser39006_008360
Enzymes [BR:sera01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Ser39006_008360
Secretion system [BR:sera02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Ser39006_008360
  Eukaryotic Sec-SRP protein
   Ser39006_008360
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA Zeta_toxin AAA_22 AAA_31 cobW AAA_30 VirC1 KTI12 AAA_24 AAA_33 YqeC AAA_16 APS_kinase Fe-ADH_2 ATP_bind_1 AAA_14 Helicase_RecD TsaE
Other DBs
NCBI-ProteinID: AUH04146
UniProt: A0A2I5THW2
LinkDB
Position
1806427..1807788
AA seq 453 aa
MFENLTDRLSRTLRTISGRGRLTEENIKETLREVRMALLEADVALPVVRDFINRVKEQSV
GQEVNKSLTPGQEFVKIVKNELTAAMGEVNAELNLAAQPPAVVLMAGLQGAGKTTSVGKL
GKFLREKQKKKVLVVSADVYRPAAIKQLETLAQSVGVDFFASDAQEKPIDIVNRALQHAK
LKFYDVLLVDTAGRLHVDDAMMDEIKQIHAAIKPIETLFVVDAMTGQDAANTAKAFSEAL
PLTGVILTKVDGDARGGAALSIRHITGKPIKFLGVGEKTEALEPFYPERIASRILGMGDV
LSLIEDLESKVDRTQAEKLAKKLKKGDGFDLTDFLDQLKQMRNMGGMASMMSKLPGMGQL
PDNVKSQMDDKVLVRMEAIINSMTRQERAKPDIIKGSRKRRIAMGSGMQVQDVNRLLKQF
DDMQRMMKKMKNGGLAKMMRGMKGMMPPGFSGR
NT seq 1362 nt   +upstreamnt  +downstreamnt
atgtttgaaaatttaaccgatcgactatcgcgcacattgcgcactattagcggccgtggc
cggctgactgaagagaatattaaagaaacattgcgtgaagtgcgcatggctctgcttgag
gctgatgtggctttgccggtagttcgtgattttatcaaccgggtcaaagagcaatcggta
ggacaagaagtcaataagagtctgacgccagggcaagagtttgtcaaaattgttaaaaat
gaactgactgctgcgatgggggaggttaatgccgaactaaatctggccgcacagccccct
gccgtggtgttgatggctggcctgcaaggggccggtaaaacaaccagcgtgggaaagctg
ggcaaatttctgcgtgagaagcaaaagaaaaaagtgctggtggtttctgccgacgtttac
cgtcctgcagccattaaacagttggagaccttggctcaatctgtcggtgtagatttcttt
gcgtcagatgcgcaggaaaaaccgattgatattgttaaccgtgcgctacagcatgccaaa
ctgaaattctacgatgttctgttggtggataccgctggccgtttgcatgtcgacgacgcc
atgatggatgagatcaagcagatccatgcagcgattaagccgatagaaaccctgtttgtc
gtcgatgccatgacggggcaggatgcggcaaataccgcgaaagcgttcagtgaagcacta
ccgttgactggggtgattctaaccaaggttgatggtgatgcacgtggcggtgctgcgctt
tctatccgtcacatcactggtaagccgattaagttcctgggtgtaggtgagaaaacggaa
gcccttgaacctttctatcctgagcgtattgcttcccgcattctcggcatgggggatgta
ctttctctgattgaggatcttgaaagcaaagttgatcgtactcaggctgaaaaactggcc
aagaaactcaaaaagggtgatggattcgatcttactgattttctggatcagctaaaacag
atgcgcaatatgggcggcatggccagcatgatgagtaaattgccggggatgggacaatta
ccggacaatgtgaagtctcaaatggatgataaagttctggtgcgcatggaagcgattatc
aactctatgactcggcaggaacgtgccaaacctgacatcatcaaaggttcccgtaaacgt
cgtattgcaatggggtctgggatgcaagtgcaggacgtaaatcgtttgttgaagcagttt
gatgatatgcaacgcatgatgaagaagatgaaaaatggcggtctggccaaaatgatgcgc
ggtatgaaaggtatgatgccaccgggattctcggggcgttaa

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